Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CLIP1P30622 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CLIP1P30622 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CLIP1P30622 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC7.8□□□□□ -1.16
CLIP1P30622 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
CLIP1P30622 BMPR1APS1-201ENST00000403332 1598 ntBASIC7.79□□□□□ -1.16
CLIP1P30622 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CLIP1P30622 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC7.79□□□□□ -1.16
CLIP1P30622 RNA5SP332-201ENST00000391063 115 ntBASIC7.79□□□□□ -1.16
CLIP1P30622 AC069213.2-201ENST00000420238 366 ntBASIC7.79□□□□□ -1.16
CLIP1P30622 GSTA7P-201ENST00000438425 448 ntBASIC7.79□□□□□ -1.16
CLIP1P30622 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC7.79□□□□□ -1.16
CLIP1P30622 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC7.79□□□□□ -1.16
CLIP1P30622 AL672167.3-201ENST00000465951 960 ntBASIC7.79□□□□□ -1.16
CLIP1P30622 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC7.79□□□□□ -1.16
CLIP1P30622 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC7.79□□□□□ -1.16
CLIP1P30622 HNRNPRP2-201ENST00000528421 743 ntBASIC7.79□□□□□ -1.16
CLIP1P30622 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC7.79□□□□□ -1.16
CLIP1P30622 AC027216.1-201ENST00000577726 685 ntBASIC7.79□□□□□ -1.16
CLIP1P30622 RN7SL802P-201ENST00000577858 299 ntBASIC7.79□□□□□ -1.16
CLIP1P30622 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC7.79□□□□□ -1.16
CLIP1P30622 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC7.79□□□□□ -1.16
CLIP1P30622 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC7.79□□□□□ -1.16
CLIP1P30622 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CLIP1P30622 SMG1P6-201ENST00000532337 2930 ntBASIC7.79□□□□□ -1.16
CLIP1P30622 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
CLIP1P30622 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC7.78□□□□□ -1.16
CLIP1P30622 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CLIP1P30622 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CLIP1P30622 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CLIP1P30622 OR51B3P-201ENST00000412287 913 ntBASIC7.78□□□□□ -1.16
CLIP1P30622 AC114755.2-201ENST00000413520 361 ntBASIC7.78□□□□□ -1.16
CLIP1P30622 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CLIP1P30622 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC7.78□□□□□ -1.16
CLIP1P30622 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC7.78□□□□□ -1.16
CLIP1P30622 MYL12BP2-201ENST00000503948 512 ntBASIC7.78□□□□□ -1.16
CLIP1P30622 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC7.78□□□□□ -1.16
CLIP1P30622 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC7.78□□□□□ -1.16
CLIP1P30622 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC7.78□□□□□ -1.16
CLIP1P30622 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC7.78□□□□□ -1.16
CLIP1P30622 AC098935.2-201ENST00000604222 466 ntBASIC7.78□□□□□ -1.16
CLIP1P30622 AC012414.7-202ENST00000622705 1090 ntBASIC7.78□□□□□ -1.16
CLIP1P30622 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC7.78□□□□□ -1.16
CLIP1P30622 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CLIP1P30622 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CLIP1P30622 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
CLIP1P30622 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CLIP1P30622 AL031123.3-201ENST00000623345 1837 ntBASIC7.78□□□□□ -1.16
CLIP1P30622 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CLIP1P30622 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CLIP1P30622 NCLP2-201ENST00000416078 1462 ntBASIC7.78□□□□□ -1.16
CLIP1P30622 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
CLIP1P30622 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
CLIP1P30622 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7.78□□□□□ -1.16
CLIP1P30622 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CLIP1P30622 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CLIP1P30622 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CLIP1P30622 QRSL1P2-201ENST00000418582 964 ntBASIC7.78□□□□□ -1.16
CLIP1P30622 AC234781.3-201ENST00000452540 973 ntBASIC7.78□□□□□ -1.16
CLIP1P30622 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC7.78□□□□□ -1.16
CLIP1P30622 RN7SL517P-201ENST00000462240 305 ntBASIC7.78□□□□□ -1.16
CLIP1P30622 MAL2-201ENST00000522112 573 ntTSL 4 BASIC7.78□□□□□ -1.16
CLIP1P30622 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC7.78□□□□□ -1.16
CLIP1P30622 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC7.78□□□□□ -1.16
CLIP1P30622 ADAM5-202ENST00000399789 1942 ntBASIC7.78□□□□□ -1.16
CLIP1P30622 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.16
CLIP1P30622 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
CLIP1P30622 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
CLIP1P30622 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC7.77□□□□□ -1.17
CLIP1P30622 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC7.77□□□□□ -1.17
CLIP1P30622 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC7.77□□□□□ -1.17
CLIP1P30622 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CLIP1P30622 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CLIP1P30622 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
CLIP1P30622 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CLIP1P30622 GLULP6-201ENST00000399502 913 ntBASIC7.77□□□□□ -1.17
CLIP1P30622 RPS3AP23-201ENST00000401762 784 ntBASIC7.77□□□□□ -1.17
CLIP1P30622 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC7.77□□□□□ -1.17
CLIP1P30622 COX6CP17-201ENST00000421389 185 ntBASIC7.77□□□□□ -1.17
CLIP1P30622 SLC9B1P4-201ENST00000421957 1288 ntBASIC7.77□□□□□ -1.17
CLIP1P30622 FABP7P1-201ENST00000424004 391 ntBASIC7.77□□□□□ -1.17
CLIP1P30622 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC7.77□□□□□ -1.17
CLIP1P30622 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
CLIP1P30622 OR1H1P-201ENST00000448731 937 ntBASIC7.77□□□□□ -1.17
CLIP1P30622 RN7SL385P-201ENST00000468873 276 ntBASIC7.77□□□□□ -1.17
CLIP1P30622 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC7.77□□□□□ -1.17
CLIP1P30622 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC7.77□□□□□ -1.17
CLIP1P30622 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC7.77□□□□□ -1.17
CLIP1P30622 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC7.77□□□□□ -1.17
CLIP1P30622 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC7.77□□□□□ -1.17
CLIP1P30622 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CLIP1P30622 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CLIP1P30622 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CLIP1P30622 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
CLIP1P30622 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
CLIP1P30622 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CLIP1P30622 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC7.76□□□□□ -1.17
CLIP1P30622 RPL18P10-201ENST00000425606 538 ntBASIC7.76□□□□□ -1.17
CLIP1P30622 NRBF2P3-201ENST00000432731 865 ntBASIC7.76□□□□□ -1.17
CLIP1P30622 AC005154.2-201ENST00000438110 379 ntBASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms