Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 RPS26P4-201ENST00000431743 355 ntBASIC4.27□□□□□ -1.73
CCL1P22362 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.27□□□□□ -1.73
CCL1P22362 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.27□□□□□ -1.73
CCL1P22362 NDUFA5P8-201ENST00000449019 346 ntBASIC4.27□□□□□ -1.73
CCL1P22362 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.27□□□□□ -1.73
CCL1P22362 SETP20-201ENST00000457046 852 ntBASIC4.27□□□□□ -1.73
CCL1P22362 COPS8P2-201ENST00000473228 627 ntBASIC4.27□□□□□ -1.73
CCL1P22362 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.27□□□□□ -1.73
CCL1P22362 RN7SKP46-201ENST00000515942 234 ntBASIC4.27□□□□□ -1.73
CCL1P22362 RNA5SP43-201ENST00000516559 110 ntBASIC4.27□□□□□ -1.73
CCL1P22362 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.27□□□□□ -1.73
CCL1P22362 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.27□□□□□ -1.73
CCL1P22362 OR7E128P-201ENST00000532736 1024 ntBASIC4.27□□□□□ -1.73
CCL1P22362 TVP23CP2-201ENST00000571473 623 ntBASIC4.27□□□□□ -1.73
CCL1P22362 EIF1P5-201ENST00000585002 234 ntBASIC4.27□□□□□ -1.73
CCL1P22362 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.27□□□□□ -1.73
CCL1P22362 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.27□□□□□ -1.73
CCL1P22362 RNF138P2-201ENST00000603490 592 ntBASIC4.27□□□□□ -1.73
CCL1P22362 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.27□□□□□ -1.73
CCL1P22362 AC087821.1-201ENST00000623639 567 ntBASIC4.27□□□□□ -1.73
CCL1P22362 AC006453.5-201ENST00000636451 619 ntBASIC4.27□□□□□ -1.73
CCL1P22362 AL049767.1-202ENST00000637826 242 ntBASIC4.27□□□□□ -1.73
CCL1P22362 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCL1P22362 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCL1P22362 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCL1P22362 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCL1P22362 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCL1P22362 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCL1P22362 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCL1P22362 AL359922.3-201ENST00000624779 1670 ntBASIC4.26□□□□□ -1.73
CCL1P22362 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCL1P22362 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCL1P22362 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
CCL1P22362 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCL1P22362 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCL1P22362 SNURFL-201ENST00000309296 343 ntBASIC4.26□□□□□ -1.73
CCL1P22362 RN7SKP74-201ENST00000362849 309 ntBASIC4.26□□□□□ -1.73
CCL1P22362 RNU6-249P-201ENST00000363016 102 ntBASIC4.26□□□□□ -1.73
CCL1P22362 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
CCL1P22362 AL512422.1-201ENST00000407033 553 ntBASIC4.26□□□□□ -1.73
CCL1P22362 MIR1286-201ENST00000408112 78 ntBASIC4.26□□□□□ -1.73
CCL1P22362 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.26□□□□□ -1.73
CCL1P22362 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.26□□□□□ -1.73
CCL1P22362 VN1R37P-201ENST00000419096 748 ntBASIC4.26□□□□□ -1.73
CCL1P22362 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.26□□□□□ -1.73
CCL1P22362 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCL1P22362 RPL34P20-201ENST00000442771 351 ntBASIC4.26□□□□□ -1.73
CCL1P22362 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.26□□□□□ -1.73
CCL1P22362 AC000111.2-201ENST00000448200 210 ntBASIC4.26□□□□□ -1.73
CCL1P22362 RPS4XP12-201ENST00000461747 709 ntBASIC4.26□□□□□ -1.73
CCL1P22362 AC112206.1-201ENST00000468416 477 ntBASIC4.26□□□□□ -1.73
CCL1P22362 RN7SL97P-201ENST00000486780 299 ntBASIC4.26□□□□□ -1.73
CCL1P22362 HMGN2P25-201ENST00000486956 268 ntBASIC4.26□□□□□ -1.73
CCL1P22362 SNRPCP2-201ENST00000504370 475 ntBASIC4.26□□□□□ -1.73
CCL1P22362 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.26□□□□□ -1.73
CCL1P22362 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCL1P22362 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.26□□□□□ -1.73
CCL1P22362 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.26□□□□□ -1.73
CCL1P22362 AC006363.1-201ENST00000603806 463 ntBASIC4.26□□□□□ -1.73
CCL1P22362 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.26□□□□□ -1.73
CCL1P22362 AL451049.1-201ENST00000608672 497 ntBASIC4.26□□□□□ -1.73
CCL1P22362 AL627230.1-201ENST00000613077 211 ntBASIC4.26□□□□□ -1.73
CCL1P22362 AL591926.8-201ENST00000616876 211 ntBASIC4.26□□□□□ -1.73
CCL1P22362 AC008115.4-201ENST00000619780 775 ntBASIC4.26□□□□□ -1.73
CCL1P22362 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.26□□□□□ -1.73
CCL1P22362 AP002505.2-201ENST00000623585 696 ntBASIC4.26□□□□□ -1.73
CCL1P22362 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCL1P22362 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCL1P22362 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCL1P22362 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCL1P22362 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCL1P22362 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCL1P22362 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCL1P22362 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
CCL1P22362 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CCL1P22362 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.26□□□□□ -1.73
CCL1P22362 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.26□□□□□ -1.73
CCL1P22362 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCL1P22362 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCL1P22362 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CCL1P22362 AC008758.3-201ENST00000507003 1829 ntBASIC4.25□□□□□ -1.73
CCL1P22362 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CCL1P22362 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCL1P22362 THAP12P4-201ENST00000528321 2266 ntBASIC4.25□□□□□ -1.73
CCL1P22362 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCL1P22362 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CCL1P22362 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCL1P22362 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCL1P22362 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.25□□□□□ -1.73
CCL1P22362 AC007068.1-201ENST00000396690 844 ntBASIC4.25□□□□□ -1.73
CCL1P22362 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCL1P22362 U3.36-201ENST00000408418 213 ntBASIC4.25□□□□□ -1.73
CCL1P22362 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCL1P22362 RGS17P1-201ENST00000423358 553 ntBASIC4.25□□□□□ -1.73
CCL1P22362 FABP7P2-201ENST00000429946 379 ntBASIC4.25□□□□□ -1.73
CCL1P22362 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.25□□□□□ -1.73
CCL1P22362 ZNF733P-202ENST00000444809 1573 ntBASIC4.25□□□□□ -1.73
CCL1P22362 FAR2P1-206ENST00000449736 709 ntBASIC4.25□□□□□ -1.73
CCL1P22362 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.25□□□□□ -1.73
CCL1P22362 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms