Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ATF1P18846 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATF1P18846 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ATF1P18846 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
ATF1P18846 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATF1P18846 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.38□□□□□ -1.71
ATF1P18846 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
ATF1P18846 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ATF1P18846 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATF1P18846 PANDAR-201ENST00000629595 1506 ntBASIC4.38□□□□□ -1.71
ATF1P18846 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATF1P18846 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
ATF1P18846 NEAT1-202ENST00000501122 22743 ntBASIC4.38□□□□□ -1.71
ATF1P18846 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.38□□□□□ -1.71
ATF1P18846 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATF1P18846 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ATF1P18846 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATF1P18846 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.38□□□□□ -1.71
ATF1P18846 RNA5SP178-201ENST00000410380 128 ntBASIC4.38□□□□□ -1.71
ATF1P18846 CDY17P-201ENST00000414121 1282 ntBASIC4.38□□□□□ -1.71
ATF1P18846 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.38□□□□□ -1.71
ATF1P18846 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.38□□□□□ -1.71
ATF1P18846 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.38□□□□□ -1.71
ATF1P18846 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.38□□□□□ -1.71
ATF1P18846 AL691482.1-201ENST00000453255 87 ntBASIC4.38□□□□□ -1.71
ATF1P18846 AC098583.1-201ENST00000480875 255 ntBASIC4.38□□□□□ -1.71
ATF1P18846 RN7SL184P-201ENST00000488308 297 ntBASIC4.38□□□□□ -1.71
ATF1P18846 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.38□□□□□ -1.71
ATF1P18846 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.38□□□□□ -1.71
ATF1P18846 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.38□□□□□ -1.71
ATF1P18846 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.38□□□□□ -1.71
ATF1P18846 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.38□□□□□ -1.71
ATF1P18846 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.38□□□□□ -1.71
ATF1P18846 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.38□□□□□ -1.71
ATF1P18846 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.38□□□□□ -1.71
ATF1P18846 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.38□□□□□ -1.71
ATF1P18846 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.38□□□□□ -1.71
ATF1P18846 AC090022.1-201ENST00000546569 311 ntBASIC4.38□□□□□ -1.71
ATF1P18846 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ATF1P18846 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.38□□□□□ -1.71
ATF1P18846 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ATF1P18846 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.38□□□□□ -1.71
ATF1P18846 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.38□□□□□ -1.71
ATF1P18846 AL359513.1-201ENST00000614364 557 ntBASIC4.38□□□□□ -1.71
ATF1P18846 AC007204.2-201ENST00000615022 616 ntBASIC4.38□□□□□ -1.71
ATF1P18846 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATF1P18846 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ATF1P18846 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ATF1P18846 AC235565.1-201ENST00000456962 1325 ntBASIC4.38□□□□□ -1.71
ATF1P18846 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
ATF1P18846 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATF1P18846 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATF1P18846 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.38□□□□□ -1.71
ATF1P18846 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
ATF1P18846 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATF1P18846 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ATF1P18846 RBPJP2-201ENST00000618187 1444 ntBASIC4.38□□□□□ -1.71
ATF1P18846 CASC19-206ENST00000641028 1430 ntBASIC4.38□□□□□ -1.71
ATF1P18846 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.37□□□□□ -1.71
ATF1P18846 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.37□□□□□ -1.71
ATF1P18846 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.37□□□□□ -1.71
ATF1P18846 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
ATF1P18846 AC107068.1-201ENST00000563286 4218 ntBASIC4.37□□□□□ -1.71
ATF1P18846 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.37□□□□□ -1.71
ATF1P18846 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ATF1P18846 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ATF1P18846 AC008549.2-201ENST00000333482 706 ntBASIC4.37□□□□□ -1.71
ATF1P18846 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.37□□□□□ -1.71
ATF1P18846 RNU2-22P-201ENST00000411266 212 ntBASIC4.37□□□□□ -1.71
ATF1P18846 QRSL1P2-201ENST00000418582 964 ntBASIC4.37□□□□□ -1.71
ATF1P18846 SLC35E1P1-201ENST00000419313 864 ntBASIC4.37□□□□□ -1.71
ATF1P18846 EIF4HP2-201ENST00000424380 563 ntBASIC4.37□□□□□ -1.71
ATF1P18846 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ATF1P18846 RPS29P14-201ENST00000431518 171 ntBASIC4.37□□□□□ -1.71
ATF1P18846 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.37□□□□□ -1.71
ATF1P18846 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.37□□□□□ -1.71
ATF1P18846 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.37□□□□□ -1.71
ATF1P18846 AL450023.3-201ENST00000440592 271 ntBASIC4.37□□□□□ -1.71
ATF1P18846 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.37□□□□□ -1.71
ATF1P18846 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.37□□□□□ -1.71
ATF1P18846 AC011225.1-201ENST00000457751 369 ntBASIC4.37□□□□□ -1.71
ATF1P18846 RPS17P2-201ENST00000461663 408 ntBASIC4.37□□□□□ -1.71
ATF1P18846 AP000942.1-201ENST00000463969 747 ntBASIC4.37□□□□□ -1.71
ATF1P18846 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
ATF1P18846 AGGF1P3-201ENST00000493675 1213 ntBASIC4.37□□□□□ -1.71
ATF1P18846 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.37□□□□□ -1.71
ATF1P18846 UGT2A3P7-201ENST00000510485 734 ntBASIC4.37□□□□□ -1.71
ATF1P18846 MTATP6P1-201ENST00000514057 681 ntBASIC4.37□□□□□ -1.71
ATF1P18846 AL671862.1-201ENST00000515851 349 ntBASIC4.37□□□□□ -1.71
ATF1P18846 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
ATF1P18846 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC4.37□□□□□ -1.71
ATF1P18846 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.37□□□□□ -1.71
ATF1P18846 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.37□□□□□ -1.71
ATF1P18846 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ATF1P18846 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.37□□□□□ -1.71
ATF1P18846 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.37□□□□□ -1.71
ATF1P18846 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ATF1P18846 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ATF1P18846 MIR3614-201ENST00000581261 86 ntBASIC4.37□□□□□ -1.71
ATF1P18846 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms