Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.54□□□□□ -1.52
COL11A1P12107 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.54□□□□□ -1.52
COL11A1P12107 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
COL11A1P12107 HNRNPRP2-201ENST00000528421 743 ntBASIC5.54□□□□□ -1.52
COL11A1P12107 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL11A1P12107 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.54□□□□□ -1.52
COL11A1P12107 AC008782.1-201ENST00000603386 430 ntBASIC5.54□□□□□ -1.52
COL11A1P12107 AC243960.7-201ENST00000623532 707 ntBASIC5.54□□□□□ -1.52
COL11A1P12107 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.54□□□□□ -1.52
COL11A1P12107 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
COL11A1P12107 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL11A1P12107 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL11A1P12107 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL11A1P12107 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL11A1P12107 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
COL11A1P12107 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL11A1P12107 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL11A1P12107 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.53□□□□□ -1.52
COL11A1P12107 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL11A1P12107 RNU4-25P-201ENST00000410569 230 ntBASIC5.53□□□□□ -1.52
COL11A1P12107 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.53□□□□□ -1.52
COL11A1P12107 CEACAMP6-201ENST00000452007 574 ntBASIC5.53□□□□□ -1.52
COL11A1P12107 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.53□□□□□ -1.52
COL11A1P12107 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.53□□□□□ -1.52
COL11A1P12107 AC016559.2-201ENST00000510759 359 ntBASIC5.53□□□□□ -1.52
COL11A1P12107 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.53□□□□□ -1.52
COL11A1P12107 AC138701.1-201ENST00000524329 714 ntBASIC5.53□□□□□ -1.52
COL11A1P12107 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL11A1P12107 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL11A1P12107 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL11A1P12107 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL11A1P12107 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL11A1P12107 AC011447.7-201ENST00000624228 1590 ntBASIC5.53□□□□□ -1.52
COL11A1P12107 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL11A1P12107 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.53□□□□□ -1.52
COL11A1P12107 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.53□□□□□ -1.52
COL11A1P12107 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL11A1P12107 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
COL11A1P12107 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
COL11A1P12107 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL11A1P12107 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL11A1P12107 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL11A1P12107 COX6CP13-201ENST00000428703 226 ntBASIC5.53□□□□□ -1.52
COL11A1P12107 NPM1P18-201ENST00000434232 732 ntBASIC5.53□□□□□ -1.52
COL11A1P12107 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.53□□□□□ -1.52
COL11A1P12107 IGBP1P5-201ENST00000507524 1000 ntBASIC5.53□□□□□ -1.52
COL11A1P12107 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.53□□□□□ -1.52
COL11A1P12107 AC040958.1-201ENST00000561102 201 ntBASIC5.53□□□□□ -1.52
COL11A1P12107 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.53□□□□□ -1.52
COL11A1P12107 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC5.53□□□□□ -1.52
COL11A1P12107 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.53□□□□□ -1.52
COL11A1P12107 AC011944.2-201ENST00000624440 683 ntBASIC5.53□□□□□ -1.52
COL11A1P12107 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
COL11A1P12107 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL11A1P12107 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL11A1P12107 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC5.52□□□□□ -1.52
COL11A1P12107 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
COL11A1P12107 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL11A1P12107 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.52□□□□□ -1.53
COL11A1P12107 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL11A1P12107 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.52□□□□□ -1.53
COL11A1P12107 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL11A1P12107 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL11A1P12107 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.52□□□□□ -1.53
COL11A1P12107 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.52□□□□□ -1.53
COL11A1P12107 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL11A1P12107 ARL4AP5-201ENST00000404372 599 ntBASIC5.52□□□□□ -1.53
COL11A1P12107 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.52□□□□□ -1.53
COL11A1P12107 RPL21P108-201ENST00000413857 481 ntBASIC5.52□□□□□ -1.53
COL11A1P12107 NPM1P36-201ENST00000415681 835 ntBASIC5.52□□□□□ -1.53
COL11A1P12107 RPL5P2-201ENST00000429598 854 ntBASIC5.52□□□□□ -1.53
COL11A1P12107 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.52□□□□□ -1.53
COL11A1P12107 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.52□□□□□ -1.53
COL11A1P12107 AL450023.3-201ENST00000440592 271 ntBASIC5.52□□□□□ -1.53
COL11A1P12107 NIP7P2-201ENST00000485801 544 ntBASIC5.52□□□□□ -1.53
COL11A1P12107 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.52□□□□□ -1.53
COL11A1P12107 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.52□□□□□ -1.53
COL11A1P12107 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.52□□□□□ -1.53
COL11A1P12107 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.52□□□□□ -1.53
COL11A1P12107 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.52□□□□□ -1.53
COL11A1P12107 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.52□□□□□ -1.53
COL11A1P12107 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.52□□□□□ -1.53
COL11A1P12107 AL034374.2-201ENST00000605281 548 ntBASIC5.52□□□□□ -1.53
COL11A1P12107 AC018695.5-201ENST00000605872 315 ntBASIC5.52□□□□□ -1.53
COL11A1P12107 AC004232.3-201ENST00000622977 525 ntBASIC5.52□□□□□ -1.53
COL11A1P12107 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL11A1P12107 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL11A1P12107 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL11A1P12107 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.52□□□□□ -1.53
COL11A1P12107 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
COL11A1P12107 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL11A1P12107 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
COL11A1P12107 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL11A1P12107 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL11A1P12107 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
COL11A1P12107 OR5M12P-201ENST00000423388 929 ntBASIC5.51□□□□□ -1.53
COL11A1P12107 RPL23AP1-201ENST00000428990 471 ntBASIC5.51□□□□□ -1.53
COL11A1P12107 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.51□□□□□ -1.53
COL11A1P12107 AC034205.1-201ENST00000520621 638 ntBASIC5.51□□□□□ -1.53
COL11A1P12107 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms