Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AL034370.1-201ENST00000397254 1590 ntBASIC4.53□□□□□ -1.68
UBCP0CG48 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
UBCP0CG48 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.53□□□□□ -1.68
UBCP0CG48 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.53□□□□□ -1.68
UBCP0CG48 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.53□□□□□ -1.68
UBCP0CG48 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
UBCP0CG48 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
UBCP0CG48 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
UBCP0CG48 LYPLA1P3-201ENST00000402650 695 ntBASIC4.53□□□□□ -1.68
UBCP0CG48 AL035079.1-201ENST00000405210 287 ntBASIC4.53□□□□□ -1.68
UBCP0CG48 RN7SKP16-201ENST00000410180 299 ntBASIC4.53□□□□□ -1.68
UBCP0CG48 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.53□□□□□ -1.68
UBCP0CG48 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC4.53□□□□□ -1.68
UBCP0CG48 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.53□□□□□ -1.68
UBCP0CG48 GAPDHP34-201ENST00000432112 823 ntBASIC4.53□□□□□ -1.68
UBCP0CG48 AC092447.2-201ENST00000435487 669 ntBASIC4.53□□□□□ -1.68
UBCP0CG48 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.53□□□□□ -1.68
UBCP0CG48 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.53□□□□□ -1.68
UBCP0CG48 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.53□□□□□ -1.68
UBCP0CG48 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.53□□□□□ -1.68
UBCP0CG48 AC011225.1-201ENST00000457751 369 ntBASIC4.53□□□□□ -1.68
UBCP0CG48 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.53□□□□□ -1.68
UBCP0CG48 AC094085.1-201ENST00000468914 584 ntBASIC4.53□□□□□ -1.68
UBCP0CG48 EIF1P7-201ENST00000487533 337 ntBASIC4.53□□□□□ -1.68
UBCP0CG48 RNA5SP464-201ENST00000516251 108 ntBASIC4.53□□□□□ -1.68
UBCP0CG48 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.53□□□□□ -1.68
UBCP0CG48 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.53□□□□□ -1.68
UBCP0CG48 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.53□□□□□ -1.68
UBCP0CG48 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.53□□□□□ -1.68
UBCP0CG48 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.53□□□□□ -1.68
UBCP0CG48 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.53□□□□□ -1.68
UBCP0CG48 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.53□□□□□ -1.68
UBCP0CG48 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.53□□□□□ -1.68
UBCP0CG48 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
UBCP0CG48 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.53□□□□□ -1.68
UBCP0CG48 BNIP3P35-201ENST00000604530 490 ntBASIC4.53□□□□□ -1.68
UBCP0CG48 AC023813.4-201ENST00000607580 580 ntBASIC4.53□□□□□ -1.68
UBCP0CG48 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.53□□□□□ -1.68
UBCP0CG48 AP005212.4-201ENST00000614206 710 ntBASIC4.53□□□□□ -1.68
UBCP0CG48 AC108359.1-201ENST00000616451 1211 ntBASIC4.53□□□□□ -1.68
UBCP0CG48 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.53□□□□□ -1.68
UBCP0CG48 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.53□□□□□ -1.68
UBCP0CG48 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
UBCP0CG48 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
UBCP0CG48 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.53□□□□□ -1.68
UBCP0CG48 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
UBCP0CG48 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
UBCP0CG48 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
UBCP0CG48 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.53□□□□□ -1.68
UBCP0CG48 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
UBCP0CG48 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
UBCP0CG48 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
UBCP0CG48 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
UBCP0CG48 CASC19-221ENST00000641309 1382 ntBASIC4.53□□□□□ -1.69
UBCP0CG48 MAPK10-349ENST00000641767 3661 ntBASIC4.52□□□□□ -1.69
UBCP0CG48 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
UBCP0CG48 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
UBCP0CG48 MAPK10-286ENST00000641208 8747 ntBASIC4.52□□□□□ -1.69
UBCP0CG48 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
UBCP0CG48 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
UBCP0CG48 AC063976.2-201ENST00000425667 3556 ntBASIC4.52□□□□□ -1.69
UBCP0CG48 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
UBCP0CG48 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
UBCP0CG48 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
UBCP0CG48 RNA5SP335-201ENST00000363817 110 ntBASIC4.52□□□□□ -1.69
UBCP0CG48 RNA5SP234-201ENST00000363916 119 ntBASIC4.52□□□□□ -1.69
UBCP0CG48 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.52□□□□□ -1.69
UBCP0CG48 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.52□□□□□ -1.69
UBCP0CG48 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.52□□□□□ -1.69
UBCP0CG48 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.52□□□□□ -1.69
UBCP0CG48 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.52□□□□□ -1.69
UBCP0CG48 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
UBCP0CG48 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
UBCP0CG48 OR4K12P-201ENST00000406538 961 ntBASIC4.52□□□□□ -1.69
UBCP0CG48 AC013429.2-201ENST00000418798 781 ntBASIC4.52□□□□□ -1.69
UBCP0CG48 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.52□□□□□ -1.69
UBCP0CG48 RPS29P10-201ENST00000439197 166 ntBASIC4.52□□□□□ -1.69
UBCP0CG48 AC064862.4-201ENST00000442180 334 ntBASIC4.52□□□□□ -1.69
UBCP0CG48 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.52□□□□□ -1.69
UBCP0CG48 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.52□□□□□ -1.69
UBCP0CG48 AC022431.1-201ENST00000450941 438 ntBASIC4.52□□□□□ -1.69
UBCP0CG48 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
UBCP0CG48 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.52□□□□□ -1.69
UBCP0CG48 AC108161.1-201ENST00000461060 402 ntBASIC4.52□□□□□ -1.69
UBCP0CG48 AC022795.1-201ENST00000473808 480 ntBASIC4.52□□□□□ -1.69
UBCP0CG48 AC007998.1-201ENST00000474156 672 ntBASIC4.52□□□□□ -1.69
UBCP0CG48 PFN1P8-201ENST00000497012 543 ntBASIC4.52□□□□□ -1.69
UBCP0CG48 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.52□□□□□ -1.69
UBCP0CG48 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.52□□□□□ -1.69
UBCP0CG48 AC074087.1-201ENST00000512059 724 ntBASIC4.52□□□□□ -1.69
UBCP0CG48 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.52□□□□□ -1.69
UBCP0CG48 RN7SKP70-201ENST00000516655 271 ntBASIC4.52□□□□□ -1.69
UBCP0CG48 AC012400.1-201ENST00000518452 381 ntBASIC4.52□□□□□ -1.69
UBCP0CG48 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.52□□□□□ -1.69
UBCP0CG48 AC022616.2-201ENST00000523185 300 ntBASIC4.52□□□□□ -1.69
UBCP0CG48 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.52□□□□□ -1.69
UBCP0CG48 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.52□□□□□ -1.69
UBCP0CG48 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.52□□□□□ -1.69
UBCP0CG48 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.52□□□□□ -1.69
UBCP0CG48 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms