Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VTNP04004 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.51□□□□□ -1.53
VTNP04004 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
VTNP04004 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.51□□□□□ -1.53
VTNP04004 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VTNP04004 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VTNP04004 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VTNP04004 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VTNP04004 SNORA48.4-201ENST00000391089 134 ntBASIC5.51□□□□□ -1.53
VTNP04004 GPS2P1-201ENST00000411761 986 ntBASIC5.51□□□□□ -1.53
VTNP04004 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.51□□□□□ -1.53
VTNP04004 HMGB1P32-201ENST00000425971 565 ntBASIC5.51□□□□□ -1.53
VTNP04004 AC093414.1-201ENST00000434712 514 ntBASIC5.51□□□□□ -1.53
VTNP04004 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.51□□□□□ -1.53
VTNP04004 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.51□□□□□ -1.53
VTNP04004 AP002371.1-201ENST00000463604 433 ntBASIC5.51□□□□□ -1.53
VTNP04004 RPS29P22-201ENST00000472363 168 ntBASIC5.51□□□□□ -1.53
VTNP04004 CR383656.6-201ENST00000550518 394 ntBASIC5.51□□□□□ -1.53
VTNP04004 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.51□□□□□ -1.53
VTNP04004 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.51□□□□□ -1.53
VTNP04004 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.51□□□□□ -1.53
VTNP04004 AC022884.2-201ENST00000578535 580 ntBASIC5.51□□□□□ -1.53
VTNP04004 MIR4737-201ENST00000583979 81 ntBASIC5.51□□□□□ -1.53
VTNP04004 uc_338.18-201ENST00000615451 175 ntBASIC5.51□□□□□ -1.53
VTNP04004 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.51□□□□□ -1.53
VTNP04004 AC108359.1-201ENST00000616451 1211 ntBASIC5.51□□□□□ -1.53
VTNP04004 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.51□□□□□ -1.53
VTNP04004 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
VTNP04004 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.51□□□□□ -1.53
VTNP04004 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.51□□□□□ -1.53
VTNP04004 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VTNP04004 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.51□□□□□ -1.53
VTNP04004 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VTNP04004 AC005261.2-201ENST00000593427 4258 ntBASIC5.51□□□□□ -1.53
VTNP04004 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
VTNP04004 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VTNP04004 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VTNP04004 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VTNP04004 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VTNP04004 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VTNP04004 AC099654.2-201ENST00000433031 1980 ntBASIC5.51□□□□□ -1.53
VTNP04004 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
VTNP04004 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
VTNP04004 SAMMSON-226ENST00000642089 1582 ntBASIC5.5□□□□□ -1.53
VTNP04004 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VTNP04004 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.5□□□□□ -1.53
VTNP04004 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
VTNP04004 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VTNP04004 AL121839.2-201ENST00000565058 6943 ntBASIC5.5□□□□□ -1.53
VTNP04004 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.5□□□□□ -1.53
VTNP04004 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.5□□□□□ -1.53
VTNP04004 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.5□□□□□ -1.53
VTNP04004 ATP5HP3-201ENST00000396994 486 ntBASIC5.5□□□□□ -1.53
VTNP04004 AC017078.1-201ENST00000416146 368 ntBASIC5.5□□□□□ -1.53
VTNP04004 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.5□□□□□ -1.53
VTNP04004 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.5□□□□□ -1.53
VTNP04004 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.5□□□□□ -1.53
VTNP04004 NPM1P18-201ENST00000434232 732 ntBASIC5.5□□□□□ -1.53
VTNP04004 RPS29P9-201ENST00000440360 171 ntBASIC5.5□□□□□ -1.53
VTNP04004 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.5□□□□□ -1.53
VTNP04004 RPS29P33-201ENST00000456717 146 ntBASIC5.5□□□□□ -1.53
VTNP04004 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.5□□□□□ -1.53
VTNP04004 SNRPCP3-201ENST00000474888 476 ntBASIC5.5□□□□□ -1.53
VTNP04004 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.5□□□□□ -1.53
VTNP04004 MTND3P6-201ENST00000485242 339 ntBASIC5.5□□□□□ -1.53
VTNP04004 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.5□□□□□ -1.53
VTNP04004 AC005412.2-201ENST00000492004 341 ntBASIC5.5□□□□□ -1.53
VTNP04004 OR2A3P-201ENST00000493774 953 ntBASIC5.5□□□□□ -1.53
VTNP04004 AC008897.1-201ENST00000494006 347 ntBASIC5.5□□□□□ -1.53
VTNP04004 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.5□□□□□ -1.53
VTNP04004 RPSAP51-201ENST00000497462 645 ntBASIC5.5□□□□□ -1.53
VTNP04004 GAPDHP56-201ENST00000506031 988 ntBASIC5.5□□□□□ -1.53
VTNP04004 AC098976.1-201ENST00000513014 541 ntBASIC5.5□□□□□ -1.53
VTNP04004 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.5□□□□□ -1.53
VTNP04004 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.5□□□□□ -1.53
VTNP04004 AC239803.2-201ENST00000610161 430 ntBASIC5.5□□□□□ -1.53
VTNP04004 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VTNP04004 AC012618.3-205ENST00000637896 1496 ntBASIC5.5□□□□□ -1.53
VTNP04004 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
VTNP04004 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
VTNP04004 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
VTNP04004 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.5□□□□□ -1.53
VTNP04004 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VTNP04004 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VTNP04004 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
VTNP04004 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
VTNP04004 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VTNP04004 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VTNP04004 CASC19-260ENST00000641828 2001 ntBASIC5.49□□□□□ -1.53
VTNP04004 RNVU1-6-201ENST00000364688 164 ntBASIC5.49□□□□□ -1.53
VTNP04004 HMGB3P7-201ENST00000400214 611 ntBASIC5.49□□□□□ -1.53
VTNP04004 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VTNP04004 RPL12P9-201ENST00000412942 488 ntBASIC5.49□□□□□ -1.53
VTNP04004 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.49□□□□□ -1.53
VTNP04004 AC004074.1-201ENST00000421810 1063 ntBASIC5.49□□□□□ -1.53
VTNP04004 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.49□□□□□ -1.53
VTNP04004 H2AFZP6-201ENST00000444403 394 ntBASIC5.49□□□□□ -1.53
VTNP04004 HMGB1P4-201ENST00000455362 567 ntBASIC5.49□□□□□ -1.53
VTNP04004 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.49□□□□□ -1.53
VTNP04004 AP001960.1-201ENST00000506494 658 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms