Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AL359715.3-201ENST00000569267 2123 ntBASIC4.63□□□□□ -1.67
SPTA1P02549 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
SPTA1P02549 OR6C69P-201ENST00000394268 893 ntBASIC4.63□□□□□ -1.67
SPTA1P02549 AC233289.1-201ENST00000403700 508 ntBASIC4.63□□□□□ -1.67
SPTA1P02549 RNU4-25P-201ENST00000410569 230 ntBASIC4.63□□□□□ -1.67
SPTA1P02549 RPS4XP16-201ENST00000427198 791 ntBASIC4.63□□□□□ -1.67
SPTA1P02549 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.63□□□□□ -1.67
SPTA1P02549 AC093827.1-201ENST00000480094 861 ntBASIC4.63□□□□□ -1.67
SPTA1P02549 MTCO1P35-201ENST00000515270 228 ntBASIC4.63□□□□□ -1.67
SPTA1P02549 H3F3BP2-201ENST00000583907 357 ntBASIC4.63□□□□□ -1.67
SPTA1P02549 AC090948.1-201ENST00000607464 549 ntBASIC4.63□□□□□ -1.67
SPTA1P02549 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SPTA1P02549 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.63□□□□□ -1.67
SPTA1P02549 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.63□□□□□ -1.67
SPTA1P02549 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC4.63□□□□□ -1.67
SPTA1P02549 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SPTA1P02549 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SPTA1P02549 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SPTA1P02549 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SPTA1P02549 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SPTA1P02549 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC4.62□□□□□ -1.67
SPTA1P02549 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SPTA1P02549 U3.3-201ENST00000362986 216 ntBASIC4.62□□□□□ -1.67
SPTA1P02549 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.62□□□□□ -1.67
SPTA1P02549 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.62□□□□□ -1.67
SPTA1P02549 RPL23AP1-201ENST00000428990 471 ntBASIC4.62□□□□□ -1.67
SPTA1P02549 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.62□□□□□ -1.67
SPTA1P02549 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.62□□□□□ -1.67
SPTA1P02549 AL358232.1-201ENST00000448030 501 ntBASIC4.62□□□□□ -1.67
SPTA1P02549 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.62□□□□□ -1.67
SPTA1P02549 AC013356.1-201ENST00000489027 564 ntBASIC4.62□□□□□ -1.67
SPTA1P02549 SLC25A14P1-201ENST00000502867 901 ntBASIC4.62□□□□□ -1.67
SPTA1P02549 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.62□□□□□ -1.67
SPTA1P02549 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.62□□□□□ -1.67
SPTA1P02549 UGP2-232ENST00000640075 567 ntTSL 5 BASIC4.62□□□□□ -1.67
SPTA1P02549 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SPTA1P02549 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.62□□□□□ -1.67
SPTA1P02549 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC4.62□□□□□ -1.67
SPTA1P02549 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SPTA1P02549 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SPTA1P02549 ZNF840P-201ENST00000504759 1996 ntBASIC4.62□□□□□ -1.67
SPTA1P02549 AC004158.1-201ENST00000564508 4319 ntBASIC4.62□□□□□ -1.67
SPTA1P02549 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.62□□□□□ -1.67
SPTA1P02549 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC4.62□□□□□ -1.67
SPTA1P02549 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SPTA1P02549 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SPTA1P02549 RNU1-74P-201ENST00000384108 171 ntBASIC4.62□□□□□ -1.67
SPTA1P02549 MIR129-1-201ENST00000384972 72 ntBASIC4.62□□□□□ -1.67
SPTA1P02549 AL009179.1-201ENST00000406085 265 ntBASIC4.62□□□□□ -1.67
SPTA1P02549 HYALP1-201ENST00000417674 1279 ntBASIC4.62□□□□□ -1.67
SPTA1P02549 RPS17P17-201ENST00000419392 409 ntBASIC4.62□□□□□ -1.67
SPTA1P02549 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.62□□□□□ -1.67
SPTA1P02549 RPL7P40-201ENST00000481703 745 ntBASIC4.62□□□□□ -1.67
SPTA1P02549 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.62□□□□□ -1.67
SPTA1P02549 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.62□□□□□ -1.67
SPTA1P02549 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.62□□□□□ -1.67
SPTA1P02549 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SPTA1P02549 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SPTA1P02549 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SPTA1P02549 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SPTA1P02549 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SPTA1P02549 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SPTA1P02549 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.61□□□□□ -1.67
SPTA1P02549 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SPTA1P02549 MIR600-201ENST00000385007 98 ntBASIC4.61□□□□□ -1.67
SPTA1P02549 OR2B7P-201ENST00000429302 934 ntBASIC4.61□□□□□ -1.67
SPTA1P02549 MTND2P28-201ENST00000457540 1044 ntBASIC4.61□□□□□ -1.67
SPTA1P02549 RN7SL542P-201ENST00000467147 294 ntBASIC4.61□□□□□ -1.67
SPTA1P02549 RPS17P5-201ENST00000498293 408 ntBASIC4.61□□□□□ -1.67
SPTA1P02549 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.61□□□□□ -1.67
SPTA1P02549 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.61□□□□□ -1.67
SPTA1P02549 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.61□□□□□ -1.67
SPTA1P02549 NPM1P42-201ENST00000560329 862 ntBASIC4.61□□□□□ -1.67
SPTA1P02549 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.61□□□□□ -1.67
SPTA1P02549 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SPTA1P02549 RPL12P25-202ENST00000598100 674 ntBASIC4.61□□□□□ -1.67
SPTA1P02549 AC005252.1-201ENST00000604518 1063 ntBASIC4.61□□□□□ -1.67
SPTA1P02549 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.61□□□□□ -1.67
SPTA1P02549 AC021106.3-201ENST00000623925 531 ntBASIC4.61□□□□□ -1.67
SPTA1P02549 AC130448.2-201ENST00000624082 374 ntBASIC4.61□□□□□ -1.67
SPTA1P02549 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SPTA1P02549 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.61□□□□□ -1.67
SPTA1P02549 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SPTA1P02549 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SPTA1P02549 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SPTA1P02549 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC4.61□□□□□ -1.67
SPTA1P02549 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.61□□□□□ -1.67
SPTA1P02549 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
SPTA1P02549 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SPTA1P02549 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SPTA1P02549 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SPTA1P02549 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SPTA1P02549 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SPTA1P02549 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.61□□□□□ -1.67
SPTA1P02549 AL358176.3-201ENST00000420757 454 ntBASIC4.61□□□□□ -1.67
SPTA1P02549 AL732292.1-201ENST00000426692 226 ntBASIC4.61□□□□□ -1.67
SPTA1P02549 CRIP1P1-201ENST00000427567 185 ntBASIC4.61□□□□□ -1.67
SPTA1P02549 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.61□□□□□ -1.67
SPTA1P02549 NOP56P2-201ENST00000447491 769 ntBASIC4.61□□□□□ -1.67
SPTA1P02549 Z95152.1-201ENST00000453556 656 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms