Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.87□□□□□ -1.63
TNFP01375 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TNFP01375 OR1H1P-201ENST00000448731 937 ntBASIC4.87□□□□□ -1.63
TNFP01375 AC012123.2-201ENST00000485809 248 ntBASIC4.87□□□□□ -1.63
TNFP01375 AC005412.2-201ENST00000492004 341 ntBASIC4.87□□□□□ -1.63
TNFP01375 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TNFP01375 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.87□□□□□ -1.63
TNFP01375 OR7H2P-201ENST00000513483 306 ntBASIC4.87□□□□□ -1.63
TNFP01375 AC027369.5-201ENST00000533838 755 ntBASIC4.87□□□□□ -1.63
TNFP01375 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.87□□□□□ -1.63
TNFP01375 AL512310.9-201ENST00000553311 948 ntBASIC4.87□□□□□ -1.63
TNFP01375 AC091042.1-201ENST00000579213 173 ntBASIC4.87□□□□□ -1.63
TNFP01375 AC023389.2-201ENST00000580031 955 ntBASIC4.87□□□□□ -1.63
TNFP01375 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.87□□□□□ -1.63
TNFP01375 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TNFP01375 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.87□□□□□ -1.63
TNFP01375 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
TNFP01375 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.87□□□□□ -1.63
TNFP01375 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TNFP01375 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.87□□□□□ -1.63
TNFP01375 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TNFP01375 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TNFP01375 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC4.86□□□□□ -1.63
TNFP01375 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TNFP01375 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.86□□□□□ -1.63
TNFP01375 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC4.86□□□□□ -1.63
TNFP01375 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.86□□□□□ -1.63
TNFP01375 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.86□□□□□ -1.63
TNFP01375 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC4.86□□□□□ -1.63
TNFP01375 RPA2P2-201ENST00000419698 796 ntBASIC4.86□□□□□ -1.63
TNFP01375 AL354766.1-201ENST00000423396 542 ntBASIC4.86□□□□□ -1.63
TNFP01375 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.86□□□□□ -1.63
TNFP01375 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.86□□□□□ -1.63
TNFP01375 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.86□□□□□ -1.63
TNFP01375 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.86□□□□□ -1.63
TNFP01375 RBMY2TP-201ENST00000451162 947 ntBASIC4.86□□□□□ -1.63
TNFP01375 CBX1P2-201ENST00000453841 458 ntBASIC4.86□□□□□ -1.63
TNFP01375 RPSAP51-201ENST00000497462 645 ntBASIC4.86□□□□□ -1.63
TNFP01375 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.86□□□□□ -1.63
TNFP01375 MORF4L1P3-201ENST00000525966 950 ntBASIC4.86□□□□□ -1.63
TNFP01375 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TNFP01375 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.86□□□□□ -1.63
TNFP01375 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.86□□□□□ -1.63
TNFP01375 MTCYBP13-201ENST00000578634 1093 ntBASIC4.86□□□□□ -1.63
TNFP01375 MIR4433B-201ENST00000581329 102 ntBASIC4.86□□□□□ -1.63
TNFP01375 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.86□□□□□ -1.63
TNFP01375 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.86□□□□□ -1.63
TNFP01375 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
TNFP01375 AC018695.5-201ENST00000605872 315 ntBASIC4.86□□□□□ -1.63
TNFP01375 AL161616.1-201ENST00000611867 286 ntBASIC4.86□□□□□ -1.63
TNFP01375 AL049794.2-201ENST00000616301 365 ntBASIC4.86□□□□□ -1.63
TNFP01375 AC091932.2-201ENST00000623014 291 ntBASIC4.86□□□□□ -1.63
TNFP01375 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.86□□□□□ -1.63
TNFP01375 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
TNFP01375 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
TNFP01375 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.86□□□□□ -1.63
TNFP01375 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TNFP01375 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TNFP01375 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
TNFP01375 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TNFP01375 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TNFP01375 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TNFP01375 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
TNFP01375 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TNFP01375 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TNFP01375 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
TNFP01375 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TNFP01375 CYB5AP4-201ENST00000396692 399 ntBASIC4.85□□□□□ -1.63
TNFP01375 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TNFP01375 RNA5SP113-201ENST00000410486 84 ntBASIC4.85□□□□□ -1.63
TNFP01375 RNU2-50P-201ENST00000410494 143 ntBASIC4.85□□□□□ -1.63
TNFP01375 Y_RNA.625-201ENST00000411256 107 ntBASIC4.85□□□□□ -1.63
TNFP01375 RPL12P9-201ENST00000412942 488 ntBASIC4.85□□□□□ -1.63
TNFP01375 DPPA2P2-201ENST00000418220 897 ntBASIC4.85□□□□□ -1.63
TNFP01375 VTI1BP4-201ENST00000427516 527 ntBASIC4.85□□□□□ -1.63
TNFP01375 AL450023.3-201ENST00000440592 271 ntBASIC4.85□□□□□ -1.63
TNFP01375 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.85□□□□□ -1.63
TNFP01375 CEACAMP9-201ENST00000442990 513 ntBASIC4.85□□□□□ -1.63
TNFP01375 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.85□□□□□ -1.63
TNFP01375 OR52E3P-201ENST00000452083 936 ntBASIC4.85□□□□□ -1.63
TNFP01375 AC234781.3-201ENST00000452540 973 ntBASIC4.85□□□□□ -1.63
TNFP01375 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.85□□□□□ -1.63
TNFP01375 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.85□□□□□ -1.63
TNFP01375 AC116562.1-201ENST00000485355 781 ntBASIC4.85□□□□□ -1.63
TNFP01375 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.85□□□□□ -1.63
TNFP01375 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.85□□□□□ -1.63
TNFP01375 AC063949.1-201ENST00000552900 865 ntBASIC4.85□□□□□ -1.63
TNFP01375 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.85□□□□□ -1.63
TNFP01375 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.85□□□□□ -1.63
TNFP01375 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.85□□□□□ -1.63
TNFP01375 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.85□□□□□ -1.63
TNFP01375 AL391358.1-201ENST00000605342 190 ntBASIC4.85□□□□□ -1.63
TNFP01375 AC026367.3-201ENST00000619032 590 ntBASIC4.85□□□□□ -1.63
TNFP01375 AC243960.7-201ENST00000623532 707 ntBASIC4.85□□□□□ -1.63
TNFP01375 AC087821.1-201ENST00000623639 567 ntBASIC4.85□□□□□ -1.63
TNFP01375 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.85□□□□□ -1.63
TNFP01375 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.85□□□□□ -1.63
TNFP01375 AP000473.2-201ENST00000602659 1537 ntBASIC4.85□□□□□ -1.63
TNFP01375 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TNFP01375 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms