Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.07□□□□□ -1.6
NKX2-2O95096 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.07□□□□□ -1.6
NKX2-2O95096 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.07□□□□□ -1.6
NKX2-2O95096 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.07□□□□□ -1.6
NKX2-2O95096 SEPT7P3-201ENST00000455017 621 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.07□□□□□ -1.6
NKX2-2O95096 AC096741.1-201ENST00000472250 846 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NKX2-2O95096 AC093801.2-201ENST00000503966 1050 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.07□□□□□ -1.6
NKX2-2O95096 TMEM97P2-201ENST00000517841 403 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.07□□□□□ -1.6
NKX2-2O95096 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.07□□□□□ -1.6
NKX2-2O95096 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.07□□□□□ -1.6
NKX2-2O95096 AP000619.2-201ENST00000546014 969 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.07□□□□□ -1.6
NKX2-2O95096 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.07□□□□□ -1.6
NKX2-2O95096 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.07□□□□□ -1.6
NKX2-2O95096 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.07□□□□□ -1.6
NKX2-2O95096 MIR4675-201ENST00000577898 77 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 MIR1273E-201ENST00000581165 102 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.07□□□□□ -1.6
NKX2-2O95096 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NKX2-2O95096 FO393422.1-201ENST00000603908 708 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 AC245100.7-201ENST00000609678 442 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 AC010632.3-201ENST00000611377 369 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 AL162574.1-201ENST00000615702 950 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 AC007275.1-201ENST00000621243 671 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 AC074140.1-201ENST00000621617 208 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 AC009269.6-201ENST00000621778 588 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.07□□□□□ -1.6
NKX2-2O95096 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.07□□□□□ -1.6
NKX2-2O95096 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.07□□□□□ -1.6
NKX2-2O95096 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NKX2-2O95096 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.07□□□□□ -1.6
NKX2-2O95096 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
NKX2-2O95096 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NKX2-2O95096 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NKX2-2O95096 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.07□□□□□ -1.6
NKX2-2O95096 AC140134.1-201ENST00000511830 3544 ntBASIC5.07□□□□□ -1.6
NKX2-2O95096 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.07□□□□□ -1.6
NKX2-2O95096 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NKX2-2O95096 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.07□□□□□ -1.6
NKX2-2O95096 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
NKX2-2O95096 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NKX2-2O95096 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NKX2-2O95096 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
NKX2-2O95096 AC007996.1-201ENST00000620414 2821 ntBASIC5.06□□□□□ -1.6
NKX2-2O95096 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NKX2-2O95096 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.06□□□□□ -1.6
NKX2-2O95096 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NKX2-2O95096 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NKX2-2O95096 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NKX2-2O95096 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.06□□□□□ -1.6
NKX2-2O95096 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NKX2-2O95096 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NKX2-2O95096 TMSB4XP4-201ENST00000323496 618 ntBASIC5.06□□□□□ -1.6
NKX2-2O95096 HMGB3P19-201ENST00000403971 560 ntBASIC5.06□□□□□ -1.6
NKX2-2O95096 HMGB1P13-201ENST00000406019 642 ntBASIC5.06□□□□□ -1.6
NKX2-2O95096 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.06□□□□□ -1.6
NKX2-2O95096 AC008173.1-201ENST00000418901 264 ntBASIC5.06□□□□□ -1.6
NKX2-2O95096 VN1R37P-201ENST00000419096 748 ntBASIC5.06□□□□□ -1.6
NKX2-2O95096 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.06□□□□□ -1.6
NKX2-2O95096 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.06□□□□□ -1.6
NKX2-2O95096 AKR1B10P1-201ENST00000425765 942 ntBASIC5.06□□□□□ -1.6
NKX2-2O95096 SEC63P1-201ENST00000425785 1258 ntBASIC5.06□□□□□ -1.6
NKX2-2O95096 AC013262.1-201ENST00000426710 252 ntBASIC5.06□□□□□ -1.6
NKX2-2O95096 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.06□□□□□ -1.6
NKX2-2O95096 AC002069.1-201ENST00000429649 1159 ntBASIC5.06□□□□□ -1.6
NKX2-2O95096 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.06□□□□□ -1.6
NKX2-2O95096 AP000281.1-201ENST00000444036 316 ntBASIC5.06□□□□□ -1.6
NKX2-2O95096 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.06□□□□□ -1.6
NKX2-2O95096 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NKX2-2O95096 AC073909.1-201ENST00000447112 999 ntBASIC5.06□□□□□ -1.6
NKX2-2O95096 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.06□□□□□ -1.6
NKX2-2O95096 PPIAP19-201ENST00000486414 492 ntBASIC5.06□□□□□ -1.6
NKX2-2O95096 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.06□□□□□ -1.6
NKX2-2O95096 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.06□□□□□ -1.6
NKX2-2O95096 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.06□□□□□ -1.6
NKX2-2O95096 AC109464.1-201ENST00000511091 819 ntBASIC5.06□□□□□ -1.6
NKX2-2O95096 MTND6P2-201ENST00000512226 524 ntBASIC5.06□□□□□ -1.6
NKX2-2O95096 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.06□□□□□ -1.6
NKX2-2O95096 SCARNA20.4-201ENST00000516969 131 ntBASIC5.06□□□□□ -1.6
NKX2-2O95096 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.06□□□□□ -1.6
NKX2-2O95096 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.06□□□□□ -1.6
NKX2-2O95096 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.06□□□□□ -1.6
NKX2-2O95096 AC008083.2-201ENST00000546707 476 ntBASIC5.06□□□□□ -1.6
NKX2-2O95096 OR11H3P-201ENST00000554547 982 ntBASIC5.06□□□□□ -1.6
NKX2-2O95096 CD24P2-201ENST00000565486 219 ntBASIC5.06□□□□□ -1.6
NKX2-2O95096 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.06□□□□□ -1.6
NKX2-2O95096 AC015720.2-201ENST00000567709 334 ntBASIC5.06□□□□□ -1.6
NKX2-2O95096 AC016839.1-201ENST00000578162 867 ntBASIC5.06□□□□□ -1.6
NKX2-2O95096 MIR3614-201ENST00000581261 86 ntBASIC5.06□□□□□ -1.6
NKX2-2O95096 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.06□□□□□ -1.6
NKX2-2O95096 AC018618.2-201ENST00000604770 446 ntBASIC5.06□□□□□ -1.6
NKX2-2O95096 RN7SL787P-201ENST00000613000 284 ntBASIC5.06□□□□□ -1.6
NKX2-2O95096 VN1R9P-201ENST00000614184 867 ntBASIC5.06□□□□□ -1.6
NKX2-2O95096 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms