Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 VN1R9P-201ENST00000614184 867 ntBASIC5.88□□□□□ -1.47
CCDC78A2IDD5 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC78A2IDD5 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC78A2IDD5 AL445670.1-201ENST00000618889 801 ntBASIC5.88□□□□□ -1.47
CCDC78A2IDD5 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC78A2IDD5 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC78A2IDD5 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC78A2IDD5 AL121594.5-201ENST00000631724 573 ntBASIC5.88□□□□□ -1.47
CCDC78A2IDD5 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
CCDC78A2IDD5 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC78A2IDD5 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC78A2IDD5 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.88□□□□□ -1.47
CCDC78A2IDD5 MFSD8-213ENST00000641134 1327 ntBASIC5.88□□□□□ -1.47
CCDC78A2IDD5 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC78A2IDD5 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC78A2IDD5 MFSD8-239ENST00000641590 2479 ntBASIC5.88□□□□□ -1.47
CCDC78A2IDD5 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CCDC78A2IDD5 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC78A2IDD5 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC78A2IDD5 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC78A2IDD5 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CCDC78A2IDD5 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC78A2IDD5 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC78A2IDD5 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC78A2IDD5 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 AC018809.2-201ENST00000602436 3823 ntBASIC5.87□□□□□ -1.47
CCDC78A2IDD5 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 HNRNPDP2-201ENST00000406475 478 ntBASIC5.87□□□□□ -1.47
CCDC78A2IDD5 RN7SKP17-201ENST00000411242 351 ntBASIC5.87□□□□□ -1.47
CCDC78A2IDD5 UBE2V1P11-201ENST00000411559 285 ntBASIC5.87□□□□□ -1.47
CCDC78A2IDD5 AL445213.1-201ENST00000412589 747 ntBASIC5.87□□□□□ -1.47
CCDC78A2IDD5 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 NENFP1-201ENST00000419476 466 ntBASIC5.87□□□□□ -1.47
CCDC78A2IDD5 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 IPPKP1-201ENST00000422501 768 ntBASIC5.87□□□□□ -1.47
CCDC78A2IDD5 AC093084.1-201ENST00000424233 687 ntBASIC5.87□□□□□ -1.47
CCDC78A2IDD5 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 BX323845.3-201ENST00000428215 527 ntBASIC5.87□□□□□ -1.47
CCDC78A2IDD5 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.87□□□□□ -1.47
CCDC78A2IDD5 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 AC018638.3-201ENST00000461273 132 ntBASIC5.87□□□□□ -1.47
CCDC78A2IDD5 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 ST13P12-201ENST00000508958 1094 ntBASIC5.87□□□□□ -1.47
CCDC78A2IDD5 OR5H7P-201ENST00000514084 930 ntBASIC5.87□□□□□ -1.47
CCDC78A2IDD5 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 MTND4P33-201ENST00000556706 766 ntBASIC5.87□□□□□ -1.47
CCDC78A2IDD5 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 AC109446.2-201ENST00000567872 497 ntBASIC5.87□□□□□ -1.47
CCDC78A2IDD5 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 AC015726.1-201ENST00000602353 681 ntBASIC5.87□□□□□ -1.47
CCDC78A2IDD5 AL355974.3-201ENST00000617383 467 ntBASIC5.87□□□□□ -1.47
CCDC78A2IDD5 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 AL513185.3-201ENST00000433335 1300 ntBASIC5.87□□□□□ -1.47
CCDC78A2IDD5 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 AC232271.1-201ENST00000602455 2715 ntBASIC5.87□□□□□ -1.47
CCDC78A2IDD5 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC78A2IDD5 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC78A2IDD5 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC78A2IDD5 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC78A2IDD5 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC78A2IDD5 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC78A2IDD5 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC78A2IDD5 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC78A2IDD5 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC78A2IDD5 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC78A2IDD5 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
CCDC78A2IDD5 SNORD56.4-201ENST00000363883 71 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms