Protein–RNA interactions for Protein: Q9Y6W3

CAPN7, Calpain-7, humanhuman

Predictions only

Length 813 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7Q9Y6W3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CAPN7Q9Y6W3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CAPN7Q9Y6W3 POU5F1P4-201ENST00000413175 1085 ntBASIC19.55■□□□□ 0.72
CAPN7Q9Y6W3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CAPN7Q9Y6W3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.55■□□□□ 0.72
CAPN7Q9Y6W3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CAPN7Q9Y6W3 AC008175.2-201ENST00000612840 297 ntBASIC19.55■□□□□ 0.72
CAPN7Q9Y6W3 AL035685.1-201ENST00000636663 812 ntBASIC19.55■□□□□ 0.72
CAPN7Q9Y6W3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CAPN7Q9Y6W3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CAPN7Q9Y6W3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CAPN7Q9Y6W3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CAPN7Q9Y6W3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.55■□□□□ 0.72
CAPN7Q9Y6W3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.55■□□□□ 0.72
CAPN7Q9Y6W3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CAPN7Q9Y6W3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CAPN7Q9Y6W3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN7Q9Y6W3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN7Q9Y6W3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN7Q9Y6W3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN7Q9Y6W3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN7Q9Y6W3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CAPN7Q9Y6W3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN7Q9Y6W3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN7Q9Y6W3 AC245052.3-201ENST00000450182 901 ntBASIC19.54■□□□□ 0.72
CAPN7Q9Y6W3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN7Q9Y6W3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN7Q9Y6W3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN7Q9Y6W3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN7Q9Y6W3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.54■□□□□ 0.72
CAPN7Q9Y6W3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN7Q9Y6W3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN7Q9Y6W3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CAPN7Q9Y6W3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.54■□□□□ 0.72
CAPN7Q9Y6W3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN7Q9Y6W3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN7Q9Y6W3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CAPN7Q9Y6W3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.54■□□□□ 0.72
CAPN7Q9Y6W3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CAPN7Q9Y6W3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN7Q9Y6W3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CAPN7Q9Y6W3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN7Q9Y6W3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.54■□□□□ 0.72
CAPN7Q9Y6W3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN7Q9Y6W3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN7Q9Y6W3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.53■□□□□ 0.72
CAPN7Q9Y6W3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.53■□□□□ 0.72
CAPN7Q9Y6W3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN7Q9Y6W3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.53■□□□□ 0.72
CAPN7Q9Y6W3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN7Q9Y6W3 TNRC18P3-201ENST00000441896 2691 ntBASIC19.53■□□□□ 0.72
CAPN7Q9Y6W3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.53■□□□□ 0.72
CAPN7Q9Y6W3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN7Q9Y6W3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.53■□□□□ 0.72
CAPN7Q9Y6W3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.53■□□□□ 0.72
CAPN7Q9Y6W3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.53■□□□□ 0.72
CAPN7Q9Y6W3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.53■□□□□ 0.72
CAPN7Q9Y6W3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN7Q9Y6W3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN7Q9Y6W3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN7Q9Y6W3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN7Q9Y6W3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN7Q9Y6W3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN7Q9Y6W3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.53■□□□□ 0.72
CAPN7Q9Y6W3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
CAPN7Q9Y6W3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
CAPN7Q9Y6W3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.52■□□□□ 0.72
CAPN7Q9Y6W3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CAPN7Q9Y6W3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CAPN7Q9Y6W3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CAPN7Q9Y6W3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CAPN7Q9Y6W3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CAPN7Q9Y6W3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CAPN7Q9Y6W3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CAPN7Q9Y6W3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CAPN7Q9Y6W3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CAPN7Q9Y6W3 WIZP1-201ENST00000531444 2299 ntBASIC19.52■□□□□ 0.72
CAPN7Q9Y6W3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.52■□□□□ 0.72
CAPN7Q9Y6W3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CAPN7Q9Y6W3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.52■□□□□ 0.72
CAPN7Q9Y6W3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CAPN7Q9Y6W3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CAPN7Q9Y6W3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CAPN7Q9Y6W3 AC009053.2-201ENST00000563701 2365 ntBASIC19.52■□□□□ 0.72
CAPN7Q9Y6W3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CAPN7Q9Y6W3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CAPN7Q9Y6W3 DPP3P2-201ENST00000416030 1696 ntBASIC19.52■□□□□ 0.71
CAPN7Q9Y6W3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CAPN7Q9Y6W3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
CAPN7Q9Y6W3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.51■□□□□ 0.71
CAPN7Q9Y6W3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
CAPN7Q9Y6W3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CAPN7Q9Y6W3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CAPN7Q9Y6W3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CAPN7Q9Y6W3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CAPN7Q9Y6W3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CAPN7Q9Y6W3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.51■□□□□ 0.71
CAPN7Q9Y6W3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.51■□□□□ 0.71
CAPN7Q9Y6W3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CAPN7Q9Y6W3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms