Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.5■■□□□ 1.03
SCN10AQ9Y5Y9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.5■■□□□ 1.03
SCN10AQ9Y5Y9 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.5■■□□□ 1.03
SCN10AQ9Y5Y9 LINC01465-201ENST00000408887 1940 ntBASIC21.5■■□□□ 1.03
SCN10AQ9Y5Y9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.5■■□□□ 1.03
SCN10AQ9Y5Y9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCN10AQ9Y5Y9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCN10AQ9Y5Y9 AP003041.3-201ENST00000527151 707 ntBASIC21.5■■□□□ 1.03
SCN10AQ9Y5Y9 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.5■■□□□ 1.03
SCN10AQ9Y5Y9 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCN10AQ9Y5Y9 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
SCN10AQ9Y5Y9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SCN10AQ9Y5Y9 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCN10AQ9Y5Y9 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SCN10AQ9Y5Y9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCN10AQ9Y5Y9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCN10AQ9Y5Y9 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.49■■□□□ 1.03
SCN10AQ9Y5Y9 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.49■■□□□ 1.03
SCN10AQ9Y5Y9 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.49■■□□□ 1.03
SCN10AQ9Y5Y9 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.49■■□□□ 1.03
SCN10AQ9Y5Y9 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.49■■□□□ 1.03
SCN10AQ9Y5Y9 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.49■■□□□ 1.03
SCN10AQ9Y5Y9 AC011558.1-201ENST00000623459 338 ntBASIC21.49■■□□□ 1.03
SCN10AQ9Y5Y9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SCN10AQ9Y5Y9 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.49■■□□□ 1.03
SCN10AQ9Y5Y9 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.49■■□□□ 1.03
SCN10AQ9Y5Y9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.49■■□□□ 1.03
SCN10AQ9Y5Y9 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
SCN10AQ9Y5Y9 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.48■■□□□ 1.03
SCN10AQ9Y5Y9 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
SCN10AQ9Y5Y9 AL121956.5-201ENST00000625261 221 ntBASIC21.48■■□□□ 1.03
SCN10AQ9Y5Y9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.48■■□□□ 1.03
SCN10AQ9Y5Y9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SCN10AQ9Y5Y9 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SCN10AQ9Y5Y9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.48■■□□□ 1.03
SCN10AQ9Y5Y9 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.48■■□□□ 1.03
SCN10AQ9Y5Y9 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SCN10AQ9Y5Y9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SCN10AQ9Y5Y9 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
SCN10AQ9Y5Y9 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
SCN10AQ9Y5Y9 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SCN10AQ9Y5Y9 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SCN10AQ9Y5Y9 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.48■■□□□ 1.03
SCN10AQ9Y5Y9 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.48■■□□□ 1.03
SCN10AQ9Y5Y9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.48■■□□□ 1.03
SCN10AQ9Y5Y9 AL023973.1-201ENST00000624619 620 ntBASIC21.48■■□□□ 1.03
SCN10AQ9Y5Y9 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.48■■□□□ 1.03
SCN10AQ9Y5Y9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SCN10AQ9Y5Y9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.48■■□□□ 1.03
SCN10AQ9Y5Y9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
SCN10AQ9Y5Y9 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SCN10AQ9Y5Y9 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
SCN10AQ9Y5Y9 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SCN10AQ9Y5Y9 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SCN10AQ9Y5Y9 AL441883.1-201ENST00000566170 1045 ntBASIC21.47■■□□□ 1.03
SCN10AQ9Y5Y9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.47■■□□□ 1.03
SCN10AQ9Y5Y9 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.47■■□□□ 1.03
SCN10AQ9Y5Y9 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
SCN10AQ9Y5Y9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.47■■□□□ 1.03
SCN10AQ9Y5Y9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCN10AQ9Y5Y9 AC005332.1-201ENST00000577698 1310 ntBASIC21.47■■□□□ 1.03
SCN10AQ9Y5Y9 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCN10AQ9Y5Y9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SCN10AQ9Y5Y9 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCN10AQ9Y5Y9 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCN10AQ9Y5Y9 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.47■■□□□ 1.03
SCN10AQ9Y5Y9 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.47■■□□□ 1.03
SCN10AQ9Y5Y9 CKBP1-201ENST00000565489 1086 ntBASIC21.47■■□□□ 1.03
SCN10AQ9Y5Y9 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.47■■□□□ 1.03
SCN10AQ9Y5Y9 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
SCN10AQ9Y5Y9 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.47■■□□□ 1.03
SCN10AQ9Y5Y9 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
SCN10AQ9Y5Y9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCN10AQ9Y5Y9 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCN10AQ9Y5Y9 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCN10AQ9Y5Y9 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCN10AQ9Y5Y9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCN10AQ9Y5Y9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCN10AQ9Y5Y9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.46■■□□□ 1.03
SCN10AQ9Y5Y9 FAM86EP-206ENST00000510506 987 ntBASIC21.46■■□□□ 1.03
SCN10AQ9Y5Y9 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.46■■□□□ 1.03
SCN10AQ9Y5Y9 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.46■■□□□ 1.03
SCN10AQ9Y5Y9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.46■■□□□ 1.03
SCN10AQ9Y5Y9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCN10AQ9Y5Y9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCN10AQ9Y5Y9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCN10AQ9Y5Y9 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.45■■□□□ 1.03
SCN10AQ9Y5Y9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.45■■□□□ 1.03
SCN10AQ9Y5Y9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCN10AQ9Y5Y9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
SCN10AQ9Y5Y9 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
SCN10AQ9Y5Y9 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
SCN10AQ9Y5Y9 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
SCN10AQ9Y5Y9 AC092647.4-201ENST00000457211 535 ntBASIC21.45■■□□□ 1.02
SCN10AQ9Y5Y9 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.45■■□□□ 1.02
SCN10AQ9Y5Y9 AL512604.3-201ENST00000569583 964 ntBASIC21.45■■□□□ 1.02
SCN10AQ9Y5Y9 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SCN10AQ9Y5Y9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.45■■□□□ 1.02
SCN10AQ9Y5Y9 AL691432.2-201ENST00000607222 2038 ntBASIC21.45■■□□□ 1.02
SCN10AQ9Y5Y9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms