Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA6Q9Y5G7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA6Q9Y5G7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGA6Q9Y5G7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.83■□□□□ 0.61
PCDHGA6Q9Y5G7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
PCDHGA6Q9Y5G7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PCDHGA6Q9Y5G7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA6Q9Y5G7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA6Q9Y5G7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.83■□□□□ 0.6
PCDHGA6Q9Y5G7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA6Q9Y5G7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.83■□□□□ 0.6
PCDHGA6Q9Y5G7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.83■□□□□ 0.6
PCDHGA6Q9Y5G7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.83■□□□□ 0.6
PCDHGA6Q9Y5G7 AL121906.2-201ENST00000621597 723 ntBASIC18.83■□□□□ 0.6
PCDHGA6Q9Y5G7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHGA6Q9Y5G7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.83■□□□□ 0.6
PCDHGA6Q9Y5G7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHGA6Q9Y5G7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA6Q9Y5G7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA6Q9Y5G7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.83■□□□□ 0.6
PCDHGA6Q9Y5G7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHGA6Q9Y5G7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGA6Q9Y5G7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA6Q9Y5G7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA6Q9Y5G7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGA6Q9Y5G7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGA6Q9Y5G7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA6Q9Y5G7 AC087499.1-201ENST00000418141 1075 ntBASIC18.82■□□□□ 0.6
PCDHGA6Q9Y5G7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA6Q9Y5G7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA6Q9Y5G7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGA6Q9Y5G7 AL355075.4-201ENST00000554988 638 ntBASIC18.82■□□□□ 0.6
PCDHGA6Q9Y5G7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.82■□□□□ 0.6
PCDHGA6Q9Y5G7 AF186192.3-201ENST00000583427 947 ntBASIC18.82■□□□□ 0.6
PCDHGA6Q9Y5G7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGA6Q9Y5G7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.82■□□□□ 0.6
PCDHGA6Q9Y5G7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA6Q9Y5G7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA6Q9Y5G7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PCDHGA6Q9Y5G7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA6Q9Y5G7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA6Q9Y5G7 NBPF21P-201ENST00000425093 1451 ntBASIC18.82■□□□□ 0.6
PCDHGA6Q9Y5G7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA6Q9Y5G7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PCDHGA6Q9Y5G7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA6Q9Y5G7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PCDHGA6Q9Y5G7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
PCDHGA6Q9Y5G7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA6Q9Y5G7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHGA6Q9Y5G7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA6Q9Y5G7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA6Q9Y5G7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA6Q9Y5G7 TCF3P1-201ENST00000423021 1937 ntBASIC18.81■□□□□ 0.6
PCDHGA6Q9Y5G7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA6Q9Y5G7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PCDHGA6Q9Y5G7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PCDHGA6Q9Y5G7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PCDHGA6Q9Y5G7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA6Q9Y5G7 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.81■□□□□ 0.6
PCDHGA6Q9Y5G7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.81■□□□□ 0.6
PCDHGA6Q9Y5G7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHGA6Q9Y5G7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA6Q9Y5G7 AC026471.5-201ENST00000615068 467 ntBASIC18.81■□□□□ 0.6
PCDHGA6Q9Y5G7 AC097493.4-201ENST00000641197 219 ntBASIC18.81■□□□□ 0.6
PCDHGA6Q9Y5G7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA6Q9Y5G7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA6Q9Y5G7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHGA6Q9Y5G7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PCDHGA6Q9Y5G7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PCDHGA6Q9Y5G7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA6Q9Y5G7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA6Q9Y5G7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA6Q9Y5G7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA6Q9Y5G7 HTR7P1-201ENST00000538670 1336 ntBASIC18.8■□□□□ 0.6
PCDHGA6Q9Y5G7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA6Q9Y5G7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA6Q9Y5G7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA6Q9Y5G7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA6Q9Y5G7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA6Q9Y5G7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA6Q9Y5G7 TSPY15P-201ENST00000457163 923 ntBASIC18.8■□□□□ 0.6
PCDHGA6Q9Y5G7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PCDHGA6Q9Y5G7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA6Q9Y5G7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDHGA6Q9Y5G7 AC012306.2-201ENST00000609350 630 ntBASIC18.8■□□□□ 0.6
PCDHGA6Q9Y5G7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA6Q9Y5G7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PCDHGA6Q9Y5G7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA6Q9Y5G7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA6Q9Y5G7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA6Q9Y5G7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGA6Q9Y5G7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.79■□□□□ 0.6
PCDHGA6Q9Y5G7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA6Q9Y5G7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PCDHGA6Q9Y5G7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDHGA6Q9Y5G7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGA6Q9Y5G7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA6Q9Y5G7 MIR1224-201ENST00000408193 85 ntBASIC18.79■□□□□ 0.6
PCDHGA6Q9Y5G7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDHGA6Q9Y5G7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms