Protein–RNA interactions for Protein: Q9UMQ6

CAPN11, Calpain-11, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11Q9UMQ6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CAPN11Q9UMQ6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CAPN11Q9UMQ6 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.14■□□□□ 0.97
CAPN11Q9UMQ6 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CAPN11Q9UMQ6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN11Q9UMQ6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.13■□□□□ 0.97
CAPN11Q9UMQ6 LSM12P1-201ENST00000411836 588 ntBASIC21.13■□□□□ 0.97
CAPN11Q9UMQ6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN11Q9UMQ6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.13■□□□□ 0.97
CAPN11Q9UMQ6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.13■□□□□ 0.97
CAPN11Q9UMQ6 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CAPN11Q9UMQ6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.13■□□□□ 0.97
CAPN11Q9UMQ6 AC005181.1-201ENST00000604782 1256 ntBASIC21.13■□□□□ 0.97
CAPN11Q9UMQ6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN11Q9UMQ6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.13■□□□□ 0.97
CAPN11Q9UMQ6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN11Q9UMQ6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN11Q9UMQ6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
CAPN11Q9UMQ6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN11Q9UMQ6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN11Q9UMQ6 AL049812.1-201ENST00000432563 2267 ntBASIC21.12■□□□□ 0.97
CAPN11Q9UMQ6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN11Q9UMQ6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN11Q9UMQ6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
CAPN11Q9UMQ6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN11Q9UMQ6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.12■□□□□ 0.97
CAPN11Q9UMQ6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.12■□□□□ 0.97
CAPN11Q9UMQ6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN11Q9UMQ6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.12■□□□□ 0.97
CAPN11Q9UMQ6 AC133552.2-202ENST00000575694 574 ntBASIC21.12■□□□□ 0.97
CAPN11Q9UMQ6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
CAPN11Q9UMQ6 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.12■□□□□ 0.97
CAPN11Q9UMQ6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.12■□□□□ 0.97
CAPN11Q9UMQ6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN11Q9UMQ6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN11Q9UMQ6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN11Q9UMQ6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN11Q9UMQ6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CAPN11Q9UMQ6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN11Q9UMQ6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.11■□□□□ 0.97
CAPN11Q9UMQ6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN11Q9UMQ6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.11■□□□□ 0.97
CAPN11Q9UMQ6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CAPN11Q9UMQ6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CAPN11Q9UMQ6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CAPN11Q9UMQ6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN11Q9UMQ6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.11■□□□□ 0.97
CAPN11Q9UMQ6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
CAPN11Q9UMQ6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN11Q9UMQ6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN11Q9UMQ6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.11■□□□□ 0.97
CAPN11Q9UMQ6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN11Q9UMQ6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN11Q9UMQ6 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CAPN11Q9UMQ6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.11■□□□□ 0.97
CAPN11Q9UMQ6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CAPN11Q9UMQ6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CAPN11Q9UMQ6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.1■□□□□ 0.97
CAPN11Q9UMQ6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.1■□□□□ 0.97
CAPN11Q9UMQ6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN11Q9UMQ6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN11Q9UMQ6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN11Q9UMQ6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN11Q9UMQ6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN11Q9UMQ6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.1■□□□□ 0.97
CAPN11Q9UMQ6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN11Q9UMQ6 NEFHP1-201ENST00000412845 2629 ntBASIC21.1■□□□□ 0.97
CAPN11Q9UMQ6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CAPN11Q9UMQ6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN11Q9UMQ6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN11Q9UMQ6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CAPN11Q9UMQ6 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN11Q9UMQ6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN11Q9UMQ6 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN11Q9UMQ6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN11Q9UMQ6 ZNF815P-204ENST00000434898 1737 ntBASIC21.09■□□□□ 0.97
CAPN11Q9UMQ6 AC006333.2-201ENST00000607957 2099 ntBASIC21.09■□□□□ 0.97
CAPN11Q9UMQ6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN11Q9UMQ6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN11Q9UMQ6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN11Q9UMQ6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN11Q9UMQ6 AC004911.1-201ENST00000416316 871 ntBASIC21.09■□□□□ 0.97
CAPN11Q9UMQ6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.09■□□□□ 0.97
CAPN11Q9UMQ6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CAPN11Q9UMQ6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN11Q9UMQ6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.09■□□□□ 0.97
CAPN11Q9UMQ6 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN11Q9UMQ6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN11Q9UMQ6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.09■□□□□ 0.97
CAPN11Q9UMQ6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.09■□□□□ 0.97
CAPN11Q9UMQ6 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CAPN11Q9UMQ6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
CAPN11Q9UMQ6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.08■□□□□ 0.97
CAPN11Q9UMQ6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CAPN11Q9UMQ6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CAPN11Q9UMQ6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.08■□□□□ 0.97
CAPN11Q9UMQ6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CAPN11Q9UMQ6 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.08■□□□□ 0.97
CAPN11Q9UMQ6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CAPN11Q9UMQ6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms