Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN1Q9P244 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
LRFN1Q9P244 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN1Q9P244 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN1Q9P244 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN1Q9P244 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN1Q9P244 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN1Q9P244 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.93■□□□□ 0.46
LRFN1Q9P244 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN1Q9P244 MIR1238-201ENST00000408483 83 ntBASIC17.93■□□□□ 0.46
LRFN1Q9P244 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.93■□□□□ 0.46
LRFN1Q9P244 AC026271.3-201ENST00000571884 352 ntBASIC17.93■□□□□ 0.46
LRFN1Q9P244 AC131212.4-201ENST00000623606 975 ntBASIC17.93■□□□□ 0.46
LRFN1Q9P244 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.93■□□□□ 0.46
LRFN1Q9P244 AC097493.4-201ENST00000641197 219 ntBASIC17.93■□□□□ 0.46
LRFN1Q9P244 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN1Q9P244 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN1Q9P244 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.93■□□□□ 0.46
LRFN1Q9P244 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
LRFN1Q9P244 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN1Q9P244 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN1Q9P244 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN1Q9P244 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.93■□□□□ 0.46
LRFN1Q9P244 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
LRFN1Q9P244 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRFN1Q9P244 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRFN1Q9P244 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRFN1Q9P244 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
LRFN1Q9P244 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRFN1Q9P244 FAM210CP-201ENST00000445714 574 ntBASIC17.92■□□□□ 0.46
LRFN1Q9P244 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.92■□□□□ 0.46
LRFN1Q9P244 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRFN1Q9P244 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.92■□□□□ 0.46
LRFN1Q9P244 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
LRFN1Q9P244 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.92■□□□□ 0.46
LRFN1Q9P244 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRFN1Q9P244 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRFN1Q9P244 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRFN1Q9P244 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRFN1Q9P244 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRFN1Q9P244 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.92■□□□□ 0.46
LRFN1Q9P244 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
LRFN1Q9P244 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.92■□□□□ 0.46
LRFN1Q9P244 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRFN1Q9P244 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN1Q9P244 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN1Q9P244 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN1Q9P244 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN1Q9P244 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN1Q9P244 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN1Q9P244 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.91■□□□□ 0.46
LRFN1Q9P244 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN1Q9P244 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN1Q9P244 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN1Q9P244 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN1Q9P244 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN1Q9P244 GABARAPL3-202ENST00000624044 1851 ntBASIC17.91■□□□□ 0.46
LRFN1Q9P244 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
LRFN1Q9P244 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LRFN1Q9P244 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN1Q9P244 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.91■□□□□ 0.46
LRFN1Q9P244 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.91■□□□□ 0.46
LRFN1Q9P244 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN1Q9P244 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.91■□□□□ 0.46
LRFN1Q9P244 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.91■□□□□ 0.46
LRFN1Q9P244 AC012306.2-201ENST00000609350 630 ntBASIC17.91■□□□□ 0.46
LRFN1Q9P244 MIR6786-201ENST00000616843 113 ntBASIC17.91■□□□□ 0.46
LRFN1Q9P244 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.91■□□□□ 0.46
LRFN1Q9P244 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN1Q9P244 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN1Q9P244 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN1Q9P244 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN1Q9P244 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN1Q9P244 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN1Q9P244 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.91■□□□□ 0.46
LRFN1Q9P244 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.91■□□□□ 0.46
LRFN1Q9P244 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRFN1Q9P244 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.9■□□□□ 0.46
LRFN1Q9P244 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRFN1Q9P244 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
LRFN1Q9P244 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRFN1Q9P244 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
LRFN1Q9P244 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRFN1Q9P244 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRFN1Q9P244 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRFN1Q9P244 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRFN1Q9P244 AC004980.1-204ENST00000429707 299 ntBASIC17.9■□□□□ 0.46
LRFN1Q9P244 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.9■□□□□ 0.46
LRFN1Q9P244 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.9■□□□□ 0.46
LRFN1Q9P244 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.9■□□□□ 0.46
LRFN1Q9P244 KRT18P21-201ENST00000515767 1272 ntBASIC17.9■□□□□ 0.46
LRFN1Q9P244 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.9■□□□□ 0.46
LRFN1Q9P244 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
LRFN1Q9P244 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.9■□□□□ 0.46
LRFN1Q9P244 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.9■□□□□ 0.46
LRFN1Q9P244 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRFN1Q9P244 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.9■□□□□ 0.46
LRFN1Q9P244 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.9■□□□□ 0.46
LRFN1Q9P244 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRFN1Q9P244 AL391422.3-201ENST00000603791 2761 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms