Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 TCF3P1-201ENST00000423021 1937 ntBASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 PRORSD1P-201ENST00000295112 541 ntBASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 AC142381.4-202ENST00000563973 229 ntBASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 FAM197Y4-202ENST00000622692 608 ntBASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 NBPF21P-201ENST00000425093 1451 ntBASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PARPBPQ9NWS1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PARPBPQ9NWS1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.46■□□□□ 0.39
PARPBPQ9NWS1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PARPBPQ9NWS1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PARPBPQ9NWS1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.46■□□□□ 0.39
PARPBPQ9NWS1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PARPBPQ9NWS1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PARPBPQ9NWS1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.46■□□□□ 0.39
PARPBPQ9NWS1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
PARPBPQ9NWS1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PARPBPQ9NWS1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
PARPBPQ9NWS1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.46■□□□□ 0.39
PARPBPQ9NWS1 YBX1P10-201ENST00000444752 975 ntBASIC17.46■□□□□ 0.39
PARPBPQ9NWS1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.46■□□□□ 0.39
PARPBPQ9NWS1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.46■□□□□ 0.39
PARPBPQ9NWS1 RPPH1-201ENST00000516869 333 ntBASIC17.46■□□□□ 0.39
PARPBPQ9NWS1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.46■□□□□ 0.39
PARPBPQ9NWS1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.46■□□□□ 0.39
PARPBPQ9NWS1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.46■□□□□ 0.39
PARPBPQ9NWS1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.46■□□□□ 0.39
PARPBPQ9NWS1 AC110285.5-201ENST00000611501 352 ntBASIC17.46■□□□□ 0.39
PARPBPQ9NWS1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PARPBPQ9NWS1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.46■□□□□ 0.39
PARPBPQ9NWS1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.46■□□□□ 0.39
PARPBPQ9NWS1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PARPBPQ9NWS1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PARPBPQ9NWS1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PARPBPQ9NWS1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PARPBPQ9NWS1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.46■□□□□ 0.39
PARPBPQ9NWS1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.46■□□□□ 0.38
PARPBPQ9NWS1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.46■□□□□ 0.38
PARPBPQ9NWS1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PARPBPQ9NWS1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PARPBPQ9NWS1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PARPBPQ9NWS1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PARPBPQ9NWS1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PARPBPQ9NWS1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PARPBPQ9NWS1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.45■□□□□ 0.38
PARPBPQ9NWS1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PARPBPQ9NWS1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PARPBPQ9NWS1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PARPBPQ9NWS1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PARPBPQ9NWS1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.45■□□□□ 0.38
PARPBPQ9NWS1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PARPBPQ9NWS1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PARPBPQ9NWS1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PARPBPQ9NWS1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PARPBPQ9NWS1 KRASP1-201ENST00000407852 552 ntBASIC17.45■□□□□ 0.38
PARPBPQ9NWS1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.45■□□□□ 0.38
PARPBPQ9NWS1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.45■□□□□ 0.38
PARPBPQ9NWS1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PARPBPQ9NWS1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.45■□□□□ 0.38
PARPBPQ9NWS1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PARPBPQ9NWS1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PARPBPQ9NWS1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PARPBPQ9NWS1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PARPBPQ9NWS1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.45■□□□□ 0.38
PARPBPQ9NWS1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.45■□□□□ 0.38
PARPBPQ9NWS1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PARPBPQ9NWS1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PARPBPQ9NWS1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.45■□□□□ 0.38
PARPBPQ9NWS1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PARPBPQ9NWS1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms