Protein–RNA interactions for Protein: Q9NVI7

ATAD3A, ATPase family AAA domain-containing protein 3A, humanhuman

Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3AQ9NVI7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATAD3AQ9NVI7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATAD3AQ9NVI7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATAD3AQ9NVI7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.71■□□□□ 0.59
ATAD3AQ9NVI7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
ATAD3AQ9NVI7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
ATAD3AQ9NVI7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATAD3AQ9NVI7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATAD3AQ9NVI7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.71■□□□□ 0.58
ATAD3AQ9NVI7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATAD3AQ9NVI7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATAD3AQ9NVI7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ATAD3AQ9NVI7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATAD3AQ9NVI7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATAD3AQ9NVI7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATAD3AQ9NVI7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ATAD3AQ9NVI7 GPX1P1-201ENST00000388829 606 ntBASIC18.7■□□□□ 0.58
ATAD3AQ9NVI7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.7■□□□□ 0.58
ATAD3AQ9NVI7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.7■□□□□ 0.58
ATAD3AQ9NVI7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.7■□□□□ 0.58
ATAD3AQ9NVI7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.7■□□□□ 0.58
ATAD3AQ9NVI7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.7■□□□□ 0.58
ATAD3AQ9NVI7 AC093484.2-201ENST00000580996 2166 ntBASIC18.7■□□□□ 0.58
ATAD3AQ9NVI7 AC005332.7-201ENST00000614046 2005 ntBASIC18.7■□□□□ 0.58
ATAD3AQ9NVI7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.7■□□□□ 0.58
ATAD3AQ9NVI7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATAD3AQ9NVI7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ATAD3AQ9NVI7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATAD3AQ9NVI7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ATAD3AQ9NVI7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATAD3AQ9NVI7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.7■□□□□ 0.58
ATAD3AQ9NVI7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATAD3AQ9NVI7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATAD3AQ9NVI7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATAD3AQ9NVI7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATAD3AQ9NVI7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.7■□□□□ 0.58
ATAD3AQ9NVI7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATAD3AQ9NVI7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ATAD3AQ9NVI7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
ATAD3AQ9NVI7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.69■□□□□ 0.58
ATAD3AQ9NVI7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATAD3AQ9NVI7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATAD3AQ9NVI7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATAD3AQ9NVI7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATAD3AQ9NVI7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATAD3AQ9NVI7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
ATAD3AQ9NVI7 AC005082.1-201ENST00000413042 2259 ntBASIC18.69■□□□□ 0.58
ATAD3AQ9NVI7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATAD3AQ9NVI7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATAD3AQ9NVI7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ATAD3AQ9NVI7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATAD3AQ9NVI7 BX276092.2-201ENST00000417668 665 ntBASIC18.69■□□□□ 0.58
ATAD3AQ9NVI7 CDCA4P2-201ENST00000441182 718 ntBASIC18.69■□□□□ 0.58
ATAD3AQ9NVI7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.69■□□□□ 0.58
ATAD3AQ9NVI7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.69■□□□□ 0.58
ATAD3AQ9NVI7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATAD3AQ9NVI7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATAD3AQ9NVI7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ATAD3AQ9NVI7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.69■□□□□ 0.58
ATAD3AQ9NVI7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ATAD3AQ9NVI7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATAD3AQ9NVI7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ATAD3AQ9NVI7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATAD3AQ9NVI7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATAD3AQ9NVI7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.69■□□□□ 0.58
ATAD3AQ9NVI7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.69■□□□□ 0.58
ATAD3AQ9NVI7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATAD3AQ9NVI7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.69■□□□□ 0.58
ATAD3AQ9NVI7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ATAD3AQ9NVI7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 TNXA-203ENST00000507684 2038 ntBASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 MIR663A-201ENST00000385250 93 ntBASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 AL390719.1-204ENST00000412397 1219 ntBASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATAD3AQ9NVI7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms