Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.22■□□□□ 0.19
LIN7CQ9NUP9 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.22■□□□□ 0.19
LIN7CQ9NUP9 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LIN7CQ9NUP9 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LIN7CQ9NUP9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LIN7CQ9NUP9 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.22■□□□□ 0.19
LIN7CQ9NUP9 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LIN7CQ9NUP9 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LIN7CQ9NUP9 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LIN7CQ9NUP9 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LIN7CQ9NUP9 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LIN7CQ9NUP9 LSM12P1-201ENST00000411836 588 ntBASIC16.22■□□□□ 0.19
LIN7CQ9NUP9 MIPEPP3-201ENST00000412105 444 ntBASIC16.22■□□□□ 0.19
LIN7CQ9NUP9 BX276092.2-201ENST00000417668 665 ntBASIC16.22■□□□□ 0.19
LIN7CQ9NUP9 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.22■□□□□ 0.19
LIN7CQ9NUP9 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.22■□□□□ 0.19
LIN7CQ9NUP9 MIR4758-201ENST00000577688 71 ntBASIC16.22■□□□□ 0.19
LIN7CQ9NUP9 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.22■□□□□ 0.19
LIN7CQ9NUP9 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.22■□□□□ 0.19
LIN7CQ9NUP9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LIN7CQ9NUP9 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
LIN7CQ9NUP9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LIN7CQ9NUP9 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LIN7CQ9NUP9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
LIN7CQ9NUP9 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LIN7CQ9NUP9 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LIN7CQ9NUP9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LIN7CQ9NUP9 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 HLA-G-202ENST00000376815 851 ntBASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 HLA-G-203ENST00000376818 1127 ntBASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 AC092118.2-201ENST00000613495 667 ntBASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 AC105020.6-201ENST00000621523 1217 ntBASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LIN7CQ9NUP9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.18
LIN7CQ9NUP9 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.21■□□□□ 0.18
LIN7CQ9NUP9 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.2■□□□□ 0.18
LIN7CQ9NUP9 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LIN7CQ9NUP9 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LIN7CQ9NUP9 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LIN7CQ9NUP9 AC020763.4-201ENST00000623414 4170 ntBASIC16.2■□□□□ 0.18
LIN7CQ9NUP9 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
LIN7CQ9NUP9 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.2■□□□□ 0.18
LIN7CQ9NUP9 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
LIN7CQ9NUP9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LIN7CQ9NUP9 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LIN7CQ9NUP9 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LIN7CQ9NUP9 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LIN7CQ9NUP9 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LIN7CQ9NUP9 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LIN7CQ9NUP9 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LIN7CQ9NUP9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LIN7CQ9NUP9 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LIN7CQ9NUP9 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.2■□□□□ 0.18
LIN7CQ9NUP9 AL355472.2-201ENST00000422958 438 ntBASIC16.2■□□□□ 0.18
LIN7CQ9NUP9 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.2■□□□□ 0.18
LIN7CQ9NUP9 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.2■□□□□ 0.18
LIN7CQ9NUP9 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.2■□□□□ 0.18
LIN7CQ9NUP9 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LIN7CQ9NUP9 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LIN7CQ9NUP9 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.2■□□□□ 0.18
LIN7CQ9NUP9 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.2■□□□□ 0.18
LIN7CQ9NUP9 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LIN7CQ9NUP9 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms