Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
PCDHB16Q9NRJ7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.96■□□□□ 0.3
PCDHB16Q9NRJ7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCDHB16Q9NRJ7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PCDHB16Q9NRJ7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB16Q9NRJ7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB16Q9NRJ7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDHB16Q9NRJ7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB16Q9NRJ7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB16Q9NRJ7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDHB16Q9NRJ7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB16Q9NRJ7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PCDHB16Q9NRJ7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB16Q9NRJ7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
PCDHB16Q9NRJ7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB16Q9NRJ7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB16Q9NRJ7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB16Q9NRJ7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB16Q9NRJ7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PCDHB16Q9NRJ7 KRT18P68-201ENST00000392293 1000 ntBASIC16.95■□□□□ 0.3
PCDHB16Q9NRJ7 AC016769.1-201ENST00000409132 1010 ntBASIC16.95■□□□□ 0.3
PCDHB16Q9NRJ7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.95■□□□□ 0.3
PCDHB16Q9NRJ7 AC069236.1-201ENST00000604339 616 ntBASIC16.95■□□□□ 0.3
PCDHB16Q9NRJ7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB16Q9NRJ7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB16Q9NRJ7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB16Q9NRJ7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB16Q9NRJ7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB16Q9NRJ7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB16Q9NRJ7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB16Q9NRJ7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB16Q9NRJ7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHB16Q9NRJ7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 KRT18P61-201ENST00000585825 1298 ntBASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB16Q9NRJ7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCDHB16Q9NRJ7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB16Q9NRJ7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHB16Q9NRJ7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHB16Q9NRJ7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB16Q9NRJ7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB16Q9NRJ7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB16Q9NRJ7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB16Q9NRJ7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB16Q9NRJ7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB16Q9NRJ7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB16Q9NRJ7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB16Q9NRJ7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHB16Q9NRJ7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCDHB16Q9NRJ7 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.93■□□□□ 0.3
PCDHB16Q9NRJ7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHB16Q9NRJ7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.93■□□□□ 0.3
PCDHB16Q9NRJ7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.93■□□□□ 0.3
PCDHB16Q9NRJ7 AC016405.3-201ENST00000607710 860 ntBASIC16.93■□□□□ 0.3
PCDHB16Q9NRJ7 AC105020.6-201ENST00000621523 1217 ntBASIC16.93■□□□□ 0.3
PCDHB16Q9NRJ7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHB16Q9NRJ7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB16Q9NRJ7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB16Q9NRJ7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB16Q9NRJ7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCDHB16Q9NRJ7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHB16Q9NRJ7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCDHB16Q9NRJ7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB16Q9NRJ7 AC125437.2-201ENST00000625180 2167 ntBASIC16.92■□□□□ 0.3
PCDHB16Q9NRJ7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB16Q9NRJ7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB16Q9NRJ7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHB16Q9NRJ7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms