Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SLC52A3Q9NQ40 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC52A3Q9NQ40 AL031598.1-201ENST00000561511 1773 ntBASIC18.53■□□□□ 0.56
SLC52A3Q9NQ40 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC52A3Q9NQ40 GPX1P1-201ENST00000388829 606 ntBASIC18.53■□□□□ 0.56
SLC52A3Q9NQ40 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SLC52A3Q9NQ40 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC52A3Q9NQ40 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC52A3Q9NQ40 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.53■□□□□ 0.56
SLC52A3Q9NQ40 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC52A3Q9NQ40 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC52A3Q9NQ40 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC52A3Q9NQ40 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC52A3Q9NQ40 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC52A3Q9NQ40 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.53■□□□□ 0.56
SLC52A3Q9NQ40 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC52A3Q9NQ40 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC52A3Q9NQ40 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC52A3Q9NQ40 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC52A3Q9NQ40 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC52A3Q9NQ40 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.52■□□□□ 0.56
SLC52A3Q9NQ40 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.52■□□□□ 0.56
SLC52A3Q9NQ40 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.52■□□□□ 0.56
SLC52A3Q9NQ40 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC52A3Q9NQ40 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.52■□□□□ 0.56
SLC52A3Q9NQ40 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.52■□□□□ 0.56
SLC52A3Q9NQ40 AC092666.2-201ENST00000613287 246 ntBASIC18.52■□□□□ 0.56
SLC52A3Q9NQ40 AC231657.2-201ENST00000624556 255 ntBASIC18.52■□□□□ 0.56
SLC52A3Q9NQ40 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC52A3Q9NQ40 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SLC52A3Q9NQ40 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.52■□□□□ 0.55
SLC52A3Q9NQ40 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.52■□□□□ 0.55
SLC52A3Q9NQ40 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
SLC52A3Q9NQ40 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SLC52A3Q9NQ40 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC52A3Q9NQ40 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC52A3Q9NQ40 AC093525.10-201ENST00000625130 1569 ntBASIC18.51■□□□□ 0.55
SLC52A3Q9NQ40 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.51■□□□□ 0.55
SLC52A3Q9NQ40 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC52A3Q9NQ40 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC52A3Q9NQ40 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC52A3Q9NQ40 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.51■□□□□ 0.55
SLC52A3Q9NQ40 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC52A3Q9NQ40 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.51■□□□□ 0.55
SLC52A3Q9NQ40 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.51■□□□□ 0.55
SLC52A3Q9NQ40 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC52A3Q9NQ40 AC008694.1-202ENST00000636953 945 ntBASIC18.51■□□□□ 0.55
SLC52A3Q9NQ40 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.51■□□□□ 0.55
SLC52A3Q9NQ40 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC52A3Q9NQ40 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC52A3Q9NQ40 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC52A3Q9NQ40 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC52A3Q9NQ40 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.51■□□□□ 0.55
SLC52A3Q9NQ40 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SLC52A3Q9NQ40 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC52A3Q9NQ40 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC52A3Q9NQ40 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC52A3Q9NQ40 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC52A3Q9NQ40 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC52A3Q9NQ40 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC52A3Q9NQ40 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC52A3Q9NQ40 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC52A3Q9NQ40 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC52A3Q9NQ40 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC52A3Q9NQ40 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.5■□□□□ 0.55
SLC52A3Q9NQ40 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC52A3Q9NQ40 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC52A3Q9NQ40 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC52A3Q9NQ40 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC52A3Q9NQ40 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC52A3Q9NQ40 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC52A3Q9NQ40 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC52A3Q9NQ40 AC007613.1-201ENST00000572811 2597 ntBASIC18.5■□□□□ 0.55
SLC52A3Q9NQ40 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SLC52A3Q9NQ40 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC52A3Q9NQ40 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC52A3Q9NQ40 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC52A3Q9NQ40 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC52A3Q9NQ40 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC52A3Q9NQ40 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC52A3Q9NQ40 AC005082.1-201ENST00000413042 2259 ntBASIC18.49■□□□□ 0.55
SLC52A3Q9NQ40 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.49■□□□□ 0.55
SLC52A3Q9NQ40 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC52A3Q9NQ40 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC52A3Q9NQ40 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC52A3Q9NQ40 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC52A3Q9NQ40 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.49■□□□□ 0.55
SLC52A3Q9NQ40 AC016769.1-201ENST00000409132 1010 ntBASIC18.49■□□□□ 0.55
SLC52A3Q9NQ40 AC007322.1-201ENST00000426983 750 ntBASIC18.49■□□□□ 0.55
SLC52A3Q9NQ40 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.49■□□□□ 0.55
SLC52A3Q9NQ40 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC52A3Q9NQ40 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.49■□□□□ 0.55
SLC52A3Q9NQ40 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SLC52A3Q9NQ40 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SLC52A3Q9NQ40 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC52A3Q9NQ40 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC52A3Q9NQ40 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC52A3Q9NQ40 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SLC52A3Q9NQ40 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC52A3Q9NQ40 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms