Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.55■□□□□ 0.72
TM9SF3Q9HD45 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.55■□□□□ 0.72
TM9SF3Q9HD45 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.55■□□□□ 0.72
TM9SF3Q9HD45 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.55■□□□□ 0.72
TM9SF3Q9HD45 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.55■□□□□ 0.72
TM9SF3Q9HD45 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TM9SF3Q9HD45 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.55■□□□□ 0.72
TM9SF3Q9HD45 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TM9SF3Q9HD45 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TM9SF3Q9HD45 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TM9SF3Q9HD45 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TM9SF3Q9HD45 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TM9SF3Q9HD45 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TM9SF3Q9HD45 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TM9SF3Q9HD45 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TM9SF3Q9HD45 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
TM9SF3Q9HD45 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TM9SF3Q9HD45 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM9SF3Q9HD45 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM9SF3Q9HD45 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM9SF3Q9HD45 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM9SF3Q9HD45 AC116351.2-201ENST00000606540 1585 ntBASIC19.54■□□□□ 0.72
TM9SF3Q9HD45 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
TM9SF3Q9HD45 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TM9SF3Q9HD45 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM9SF3Q9HD45 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM9SF3Q9HD45 TERF1P1-201ENST00000311003 1181 ntBASIC19.54■□□□□ 0.72
TM9SF3Q9HD45 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.54■□□□□ 0.72
TM9SF3Q9HD45 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.54■□□□□ 0.72
TM9SF3Q9HD45 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.54■□□□□ 0.72
TM9SF3Q9HD45 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.54■□□□□ 0.72
TM9SF3Q9HD45 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.54■□□□□ 0.72
TM9SF3Q9HD45 AL445675.2-201ENST00000620291 557 ntBASIC19.54■□□□□ 0.72
TM9SF3Q9HD45 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TM9SF3Q9HD45 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.54■□□□□ 0.72
TM9SF3Q9HD45 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM9SF3Q9HD45 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM9SF3Q9HD45 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM9SF3Q9HD45 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM9SF3Q9HD45 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM9SF3Q9HD45 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM9SF3Q9HD45 FSCN1P1-201ENST00000568912 1481 ntBASIC19.54■□□□□ 0.72
TM9SF3Q9HD45 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TM9SF3Q9HD45 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
TM9SF3Q9HD45 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.53■□□□□ 0.72
TM9SF3Q9HD45 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.53■□□□□ 0.72
TM9SF3Q9HD45 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TM9SF3Q9HD45 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TM9SF3Q9HD45 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TM9SF3Q9HD45 MESTP1-201ENST00000404287 994 ntBASIC19.53■□□□□ 0.72
TM9SF3Q9HD45 AL137013.1-201ENST00000432946 1228 ntBASIC19.53■□□□□ 0.72
TM9SF3Q9HD45 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.53■□□□□ 0.72
TM9SF3Q9HD45 SLC25A3P1-201ENST00000443844 931 ntBASIC19.53■□□□□ 0.72
TM9SF3Q9HD45 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.53■□□□□ 0.72
TM9SF3Q9HD45 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.53■□□□□ 0.72
TM9SF3Q9HD45 AC026271.3-201ENST00000571884 352 ntBASIC19.53■□□□□ 0.72
TM9SF3Q9HD45 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.53■□□□□ 0.72
TM9SF3Q9HD45 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TM9SF3Q9HD45 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.53■□□□□ 0.72
TM9SF3Q9HD45 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TM9SF3Q9HD45 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TM9SF3Q9HD45 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TM9SF3Q9HD45 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TM9SF3Q9HD45 TFP1-202ENST00000475455 1573 ntBASIC19.53■□□□□ 0.72
TM9SF3Q9HD45 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
TM9SF3Q9HD45 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM9SF3Q9HD45 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM9SF3Q9HD45 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM9SF3Q9HD45 KRT16P6-202ENST00000425692 1426 ntBASIC19.52■□□□□ 0.72
TM9SF3Q9HD45 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM9SF3Q9HD45 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM9SF3Q9HD45 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.52■□□□□ 0.72
TM9SF3Q9HD45 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
TM9SF3Q9HD45 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.52■□□□□ 0.72
TM9SF3Q9HD45 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
TM9SF3Q9HD45 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.52■□□□□ 0.72
TM9SF3Q9HD45 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.52■□□□□ 0.72
TM9SF3Q9HD45 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.52■□□□□ 0.72
TM9SF3Q9HD45 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.52■□□□□ 0.72
TM9SF3Q9HD45 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.52■□□□□ 0.72
TM9SF3Q9HD45 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.52■□□□□ 0.72
TM9SF3Q9HD45 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TM9SF3Q9HD45 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TM9SF3Q9HD45 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TM9SF3Q9HD45 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
TM9SF3Q9HD45 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.51■□□□□ 0.71
TM9SF3Q9HD45 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TM9SF3Q9HD45 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TM9SF3Q9HD45 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.51■□□□□ 0.71
TM9SF3Q9HD45 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TM9SF3Q9HD45 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TM9SF3Q9HD45 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TM9SF3Q9HD45 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.51■□□□□ 0.71
TM9SF3Q9HD45 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.51■□□□□ 0.71
TM9SF3Q9HD45 YBX1P10-201ENST00000444752 975 ntBASIC19.51■□□□□ 0.71
TM9SF3Q9HD45 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.51■□□□□ 0.71
TM9SF3Q9HD45 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TM9SF3Q9HD45 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.51■□□□□ 0.71
TM9SF3Q9HD45 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TM9SF3Q9HD45 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms