Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR2J3Q9H1A7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR2J3Q9H1A7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
POLR2J3Q9H1A7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.05■□□□□ 0.48
POLR2J3Q9H1A7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR2J3Q9H1A7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
POLR2J3Q9H1A7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.05■□□□□ 0.48
POLR2J3Q9H1A7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.05■□□□□ 0.48
POLR2J3Q9H1A7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
POLR2J3Q9H1A7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR2J3Q9H1A7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
POLR2J3Q9H1A7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.05■□□□□ 0.48
POLR2J3Q9H1A7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR2J3Q9H1A7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR2J3Q9H1A7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 AC093503.3-201ENST00000624917 2352 ntBASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.04■□□□□ 0.48
POLR2J3Q9H1A7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
POLR2J3Q9H1A7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
POLR2J3Q9H1A7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
POLR2J3Q9H1A7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
POLR2J3Q9H1A7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
POLR2J3Q9H1A7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.03■□□□□ 0.48
POLR2J3Q9H1A7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
POLR2J3Q9H1A7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
POLR2J3Q9H1A7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
POLR2J3Q9H1A7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.03■□□□□ 0.48
POLR2J3Q9H1A7 AC073210.2-201ENST00000430369 194 ntBASIC18.03■□□□□ 0.48
POLR2J3Q9H1A7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
POLR2J3Q9H1A7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.03■□□□□ 0.48
POLR2J3Q9H1A7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.03■□□□□ 0.48
POLR2J3Q9H1A7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
POLR2J3Q9H1A7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
POLR2J3Q9H1A7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
POLR2J3Q9H1A7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
POLR2J3Q9H1A7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
POLR2J3Q9H1A7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.03■□□□□ 0.48
POLR2J3Q9H1A7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.03■□□□□ 0.48
POLR2J3Q9H1A7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
POLR2J3Q9H1A7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.02■□□□□ 0.48
POLR2J3Q9H1A7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
POLR2J3Q9H1A7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
POLR2J3Q9H1A7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
POLR2J3Q9H1A7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
POLR2J3Q9H1A7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
POLR2J3Q9H1A7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.02■□□□□ 0.48
POLR2J3Q9H1A7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
POLR2J3Q9H1A7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
POLR2J3Q9H1A7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
POLR2J3Q9H1A7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
POLR2J3Q9H1A7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
POLR2J3Q9H1A7 GPX1P1-201ENST00000388829 606 ntBASIC18.02■□□□□ 0.48
POLR2J3Q9H1A7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
POLR2J3Q9H1A7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
POLR2J3Q9H1A7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
POLR2J3Q9H1A7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
POLR2J3Q9H1A7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
POLR2J3Q9H1A7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.02■□□□□ 0.48
POLR2J3Q9H1A7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.02■□□□□ 0.48
POLR2J3Q9H1A7 AC022517.1-201ENST00000592429 346 ntBASIC18.02■□□□□ 0.48
POLR2J3Q9H1A7 AC116351.2-201ENST00000606540 1585 ntBASIC18.02■□□□□ 0.48
POLR2J3Q9H1A7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.02■□□□□ 0.48
POLR2J3Q9H1A7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
POLR2J3Q9H1A7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
POLR2J3Q9H1A7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
POLR2J3Q9H1A7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
POLR2J3Q9H1A7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
POLR2J3Q9H1A7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
POLR2J3Q9H1A7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.02■□□□□ 0.47
POLR2J3Q9H1A7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
POLR2J3Q9H1A7 LINC01465-201ENST00000408887 1940 ntBASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms