Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSBP3Q9BWW4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.29■□□□□ 0.2
SSBP3Q9BWW4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SSBP3Q9BWW4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.29■□□□□ 0.2
SSBP3Q9BWW4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSBP3Q9BWW4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSBP3Q9BWW4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSBP3Q9BWW4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSBP3Q9BWW4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SSBP3Q9BWW4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSBP3Q9BWW4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SSBP3Q9BWW4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SSBP3Q9BWW4 TUBB8P6-201ENST00000436895 1288 ntBASIC16.29■□□□□ 0.2
SSBP3Q9BWW4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SSBP3Q9BWW4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.29■□□□□ 0.2
SSBP3Q9BWW4 AC073195.1-201ENST00000607241 877 ntBASIC16.29■□□□□ 0.2
SSBP3Q9BWW4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSBP3Q9BWW4 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.29■□□□□ 0.2
SSBP3Q9BWW4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSBP3Q9BWW4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.29■□□□□ 0.2
SSBP3Q9BWW4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SSBP3Q9BWW4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.29■□□□□ 0.2
SSBP3Q9BWW4 AL391422.3-201ENST00000603791 2761 ntBASIC16.29■□□□□ 0.2
SSBP3Q9BWW4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SSBP3Q9BWW4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSBP3Q9BWW4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSBP3Q9BWW4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.29■□□□□ 0.2
SSBP3Q9BWW4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSBP3Q9BWW4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SSBP3Q9BWW4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 AC007952.6-201ENST00000573168 2673 ntBASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 AC003957.1-201ENST00000625108 2673 ntBASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 CD177P1-201ENST00000606252 935 ntBASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 AL353708.3-201ENST00000610272 989 ntBASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 AL162377.1-201ENST00000618844 1793 ntBASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.28■□□□□ 0.2
SSBP3Q9BWW4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.27■□□□□ 0.2
SSBP3Q9BWW4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SSBP3Q9BWW4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSBP3Q9BWW4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SSBP3Q9BWW4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSBP3Q9BWW4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SSBP3Q9BWW4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.27■□□□□ 0.2
SSBP3Q9BWW4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.27■□□□□ 0.2
SSBP3Q9BWW4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SSBP3Q9BWW4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSBP3Q9BWW4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSBP3Q9BWW4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.27■□□□□ 0.2
SSBP3Q9BWW4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSBP3Q9BWW4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.27■□□□□ 0.2
SSBP3Q9BWW4 KRT18P16-201ENST00000510337 1294 ntBASIC16.27■□□□□ 0.2
SSBP3Q9BWW4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.27■□□□□ 0.2
SSBP3Q9BWW4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SSBP3Q9BWW4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSBP3Q9BWW4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.27■□□□□ 0.19
SSBP3Q9BWW4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SSBP3Q9BWW4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSBP3Q9BWW4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SSBP3Q9BWW4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSBP3Q9BWW4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.27■□□□□ 0.19
SSBP3Q9BWW4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.27■□□□□ 0.19
SSBP3Q9BWW4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SSBP3Q9BWW4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSBP3Q9BWW4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
SSBP3Q9BWW4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SSBP3Q9BWW4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms