Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.49■□□□□ 0.23
HDHD3Q9BSH5 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HDHD3Q9BSH5 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HDHD3Q9BSH5 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
HDHD3Q9BSH5 AC093787.1-201ENST00000450396 207 ntBASIC16.49■□□□□ 0.23
HDHD3Q9BSH5 AC023632.3-201ENST00000521633 145 ntBASIC16.49■□□□□ 0.23
HDHD3Q9BSH5 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.49■□□□□ 0.23
HDHD3Q9BSH5 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.49■□□□□ 0.23
HDHD3Q9BSH5 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HDHD3Q9BSH5 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.49■□□□□ 0.23
HDHD3Q9BSH5 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
HDHD3Q9BSH5 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
HDHD3Q9BSH5 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.49■□□□□ 0.23
HDHD3Q9BSH5 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HDHD3Q9BSH5 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HDHD3Q9BSH5 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HDHD3Q9BSH5 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.48■□□□□ 0.23
HDHD3Q9BSH5 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HDHD3Q9BSH5 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HDHD3Q9BSH5 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.48■□□□□ 0.23
HDHD3Q9BSH5 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HDHD3Q9BSH5 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.48■□□□□ 0.23
HDHD3Q9BSH5 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.48■□□□□ 0.23
HDHD3Q9BSH5 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HDHD3Q9BSH5 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.48■□□□□ 0.23
HDHD3Q9BSH5 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.48■□□□□ 0.23
HDHD3Q9BSH5 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.48■□□□□ 0.23
HDHD3Q9BSH5 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HDHD3Q9BSH5 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HDHD3Q9BSH5 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HDHD3Q9BSH5 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.48■□□□□ 0.23
HDHD3Q9BSH5 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
HDHD3Q9BSH5 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HDHD3Q9BSH5 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.48■□□□□ 0.23
HDHD3Q9BSH5 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.48■□□□□ 0.23
HDHD3Q9BSH5 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.48■□□□□ 0.23
HDHD3Q9BSH5 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HDHD3Q9BSH5 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 AC007322.1-201ENST00000426983 750 ntBASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 BID-214ENST00000617586 542 ntTSL 5 BASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 AC018553.1-201ENST00000616682 1458 ntBASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HDHD3Q9BSH5 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HDHD3Q9BSH5 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
HDHD3Q9BSH5 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.46■□□□□ 0.23
HDHD3Q9BSH5 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.46■□□□□ 0.23
HDHD3Q9BSH5 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.46■□□□□ 0.23
HDHD3Q9BSH5 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HDHD3Q9BSH5 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.46■□□□□ 0.23
HDHD3Q9BSH5 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HDHD3Q9BSH5 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HDHD3Q9BSH5 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HDHD3Q9BSH5 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HDHD3Q9BSH5 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HDHD3Q9BSH5 AL049812.1-201ENST00000432563 2267 ntBASIC16.46■□□□□ 0.23
HDHD3Q9BSH5 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HDHD3Q9BSH5 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.46■□□□□ 0.23
HDHD3Q9BSH5 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.46■□□□□ 0.23
HDHD3Q9BSH5 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HDHD3Q9BSH5 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HDHD3Q9BSH5 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.46■□□□□ 0.23
HDHD3Q9BSH5 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HDHD3Q9BSH5 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HDHD3Q9BSH5 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HDHD3Q9BSH5 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.46■□□□□ 0.22
HDHD3Q9BSH5 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HDHD3Q9BSH5 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
HDHD3Q9BSH5 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
HDHD3Q9BSH5 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
HDHD3Q9BSH5 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
HDHD3Q9BSH5 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
HDHD3Q9BSH5 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms