Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.56■□□□□ 0.88
SMOQ99835 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.55■□□□□ 0.88
SMOQ99835 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMOQ99835 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMOQ99835 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMOQ99835 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMOQ99835 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMOQ99835 AC125437.2-201ENST00000625180 2167 ntBASIC20.55■□□□□ 0.88
SMOQ99835 KRT16P1-201ENST00000399124 1418 ntBASIC20.55■□□□□ 0.88
SMOQ99835 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
SMOQ99835 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SMOQ99835 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMOQ99835 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMOQ99835 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.55■□□□□ 0.88
SMOQ99835 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.55■□□□□ 0.88
SMOQ99835 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.55■□□□□ 0.88
SMOQ99835 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.55■□□□□ 0.88
SMOQ99835 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMOQ99835 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.55■□□□□ 0.88
SMOQ99835 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMOQ99835 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.55■□□□□ 0.88
SMOQ99835 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMOQ99835 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.55■□□□□ 0.88
SMOQ99835 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.55■□□□□ 0.88
SMOQ99835 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.54■□□□□ 0.88
SMOQ99835 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SMOQ99835 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
SMOQ99835 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.54■□□□□ 0.88
SMOQ99835 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SMOQ99835 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMOQ99835 TSPY15P-201ENST00000457163 923 ntBASIC20.54■□□□□ 0.88
SMOQ99835 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMOQ99835 MIR4785-201ENST00000585005 73 ntBASIC20.54■□□□□ 0.88
SMOQ99835 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.54■□□□□ 0.88
SMOQ99835 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.54■□□□□ 0.88
SMOQ99835 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SMOQ99835 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMOQ99835 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMOQ99835 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMOQ99835 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMOQ99835 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMOQ99835 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
SMOQ99835 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.54■□□□□ 0.88
SMOQ99835 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMOQ99835 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMOQ99835 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMOQ99835 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMOQ99835 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.53■□□□□ 0.88
SMOQ99835 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMOQ99835 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.53■□□□□ 0.88
SMOQ99835 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SMOQ99835 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.53■□□□□ 0.88
SMOQ99835 AC004980.1-204ENST00000429707 299 ntBASIC20.53■□□□□ 0.88
SMOQ99835 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.53■□□□□ 0.88
SMOQ99835 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMOQ99835 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.53■□□□□ 0.88
SMOQ99835 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.53■□□□□ 0.88
SMOQ99835 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SMOQ99835 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.53■□□□□ 0.88
SMOQ99835 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SMOQ99835 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMOQ99835 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMOQ99835 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMOQ99835 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SMOQ99835 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMOQ99835 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMOQ99835 KRT17P2-201ENST00000300992 1314 ntBASIC20.53■□□□□ 0.88
SMOQ99835 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.52■□□□□ 0.88
SMOQ99835 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SMOQ99835 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.52■□□□□ 0.88
SMOQ99835 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.52■□□□□ 0.88
SMOQ99835 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMOQ99835 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SMOQ99835 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.52■□□□□ 0.88
SMOQ99835 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SMOQ99835 AL355355.2-201ENST00000442321 338 ntBASIC20.52■□□□□ 0.88
SMOQ99835 NUDT16P1-203ENST00000513809 620 ntBASIC20.52■□□□□ 0.88
SMOQ99835 AP003071.4-201ENST00000562276 1284 ntBASIC20.52■□□□□ 0.88
SMOQ99835 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.52■□□□□ 0.88
SMOQ99835 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMOQ99835 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SMOQ99835 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
SMOQ99835 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SMOQ99835 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SMOQ99835 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.51■□□□□ 0.87
SMOQ99835 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMOQ99835 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SMOQ99835 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
SMOQ99835 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMOQ99835 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SMOQ99835 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SMOQ99835 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SMOQ99835 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SMOQ99835 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMOQ99835 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.51■□□□□ 0.87
SMOQ99835 AL355075.4-201ENST00000554988 638 ntBASIC20.51■□□□□ 0.87
SMOQ99835 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMOQ99835 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.51■□□□□ 0.87
SMOQ99835 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMOQ99835 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms