Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RPRD1AQ96P16 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.17■□□□□ 0.82
RPRD1AQ96P16 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.17■□□□□ 0.82
RPRD1AQ96P16 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPRD1AQ96P16 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.17■□□□□ 0.82
RPRD1AQ96P16 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RPRD1AQ96P16 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPRD1AQ96P16 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPRD1AQ96P16 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPRD1AQ96P16 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPRD1AQ96P16 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPRD1AQ96P16 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.17■□□□□ 0.82
RPRD1AQ96P16 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RPRD1AQ96P16 AC233702.5-201ENST00000584107 538 ntBASIC20.17■□□□□ 0.82
RPRD1AQ96P16 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.17■□□□□ 0.82
RPRD1AQ96P16 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.17■□□□□ 0.82
RPRD1AQ96P16 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPRD1AQ96P16 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RPRD1AQ96P16 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.17■□□□□ 0.82
RPRD1AQ96P16 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
RPRD1AQ96P16 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPRD1AQ96P16 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPRD1AQ96P16 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPRD1AQ96P16 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RPRD1AQ96P16 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPRD1AQ96P16 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPRD1AQ96P16 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.16■□□□□ 0.82
RPRD1AQ96P16 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.16■□□□□ 0.82
RPRD1AQ96P16 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.16■□□□□ 0.82
RPRD1AQ96P16 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
RPRD1AQ96P16 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.16■□□□□ 0.82
RPRD1AQ96P16 AP002982.1-201ENST00000492365 877 ntBASIC20.16■□□□□ 0.82
RPRD1AQ96P16 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RPRD1AQ96P16 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.16■□□□□ 0.82
RPRD1AQ96P16 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.16■□□□□ 0.82
RPRD1AQ96P16 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.16■□□□□ 0.82
RPRD1AQ96P16 C1QL1P1-201ENST00000568105 661 ntBASIC20.16■□□□□ 0.82
RPRD1AQ96P16 AF186192.3-201ENST00000583427 947 ntBASIC20.16■□□□□ 0.82
RPRD1AQ96P16 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RPRD1AQ96P16 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.16■□□□□ 0.82
RPRD1AQ96P16 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RPRD1AQ96P16 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPRD1AQ96P16 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.16■□□□□ 0.82
RPRD1AQ96P16 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RPRD1AQ96P16 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPRD1AQ96P16 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPRD1AQ96P16 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.16■□□□□ 0.82
RPRD1AQ96P16 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
RPRD1AQ96P16 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPRD1AQ96P16 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.15■□□□□ 0.82
RPRD1AQ96P16 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPRD1AQ96P16 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPRD1AQ96P16 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPRD1AQ96P16 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
RPRD1AQ96P16 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPRD1AQ96P16 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RPRD1AQ96P16 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
RPRD1AQ96P16 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.15■□□□□ 0.82
RPRD1AQ96P16 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPRD1AQ96P16 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPRD1AQ96P16 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RPRD1AQ96P16 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.15■□□□□ 0.82
RPRD1AQ96P16 AP001412.1-201ENST00000608405 714 ntBASIC20.15■□□□□ 0.82
RPRD1AQ96P16 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPRD1AQ96P16 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPRD1AQ96P16 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPRD1AQ96P16 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPRD1AQ96P16 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPRD1AQ96P16 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPRD1AQ96P16 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
RPRD1AQ96P16 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RPRD1AQ96P16 AC073130.3-201ENST00000624389 2278 ntBASIC20.14■□□□□ 0.81
RPRD1AQ96P16 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPRD1AQ96P16 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RPRD1AQ96P16 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPRD1AQ96P16 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RPRD1AQ96P16 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPRD1AQ96P16 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.14■□□□□ 0.81
RPRD1AQ96P16 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.14■□□□□ 0.81
RPRD1AQ96P16 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.14■□□□□ 0.81
RPRD1AQ96P16 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.14■□□□□ 0.81
RPRD1AQ96P16 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.14■□□□□ 0.81
RPRD1AQ96P16 AL049637.2-201ENST00000641778 930 ntBASIC20.14■□□□□ 0.81
RPRD1AQ96P16 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPRD1AQ96P16 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.14■□□□□ 0.81
RPRD1AQ96P16 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.14■□□□□ 0.81
RPRD1AQ96P16 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RPRD1AQ96P16 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPRD1AQ96P16 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RPRD1AQ96P16 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RPRD1AQ96P16 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RPRD1AQ96P16 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.13■□□□□ 0.81
RPRD1AQ96P16 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPRD1AQ96P16 KRT8P8-201ENST00000434750 1448 ntBASIC20.13■□□□□ 0.81
RPRD1AQ96P16 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.13■□□□□ 0.81
RPRD1AQ96P16 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.13■□□□□ 0.81
RPRD1AQ96P16 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RPRD1AQ96P16 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPRD1AQ96P16 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.13■□□□□ 0.81
RPRD1AQ96P16 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms