Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CFAP54Q96N23 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.23■□□□□ 0.67
CFAP54Q96N23 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CFAP54Q96N23 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.23■□□□□ 0.67
CFAP54Q96N23 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CFAP54Q96N23 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CFAP54Q96N23 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.23■□□□□ 0.67
CFAP54Q96N23 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CFAP54Q96N23 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.23■□□□□ 0.67
CFAP54Q96N23 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.23■□□□□ 0.67
CFAP54Q96N23 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CFAP54Q96N23 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CFAP54Q96N23 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CFAP54Q96N23 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CFAP54Q96N23 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CFAP54Q96N23 MIR564-202ENST00000385049 94 ntBASIC19.22■□□□□ 0.67
CFAP54Q96N23 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CFAP54Q96N23 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.22■□□□□ 0.67
CFAP54Q96N23 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CFAP54Q96N23 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CFAP54Q96N23 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.22■□□□□ 0.67
CFAP54Q96N23 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.22■□□□□ 0.67
CFAP54Q96N23 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CFAP54Q96N23 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CFAP54Q96N23 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CFAP54Q96N23 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CFAP54Q96N23 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CFAP54Q96N23 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CFAP54Q96N23 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
CFAP54Q96N23 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.22■□□□□ 0.67
CFAP54Q96N23 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.22■□□□□ 0.67
CFAP54Q96N23 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.22■□□□□ 0.67
CFAP54Q96N23 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CFAP54Q96N23 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CFAP54Q96N23 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.22■□□□□ 0.67
CFAP54Q96N23 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CFAP54Q96N23 BX842568.4-201ENST00000421222 227 ntBASIC19.21■□□□□ 0.67
CFAP54Q96N23 AC112907.2-201ENST00000448639 330 ntBASIC19.21■□□□□ 0.67
CFAP54Q96N23 KRT18P31-201ENST00000506277 1292 ntBASIC19.21■□□□□ 0.67
CFAP54Q96N23 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.21■□□□□ 0.67
CFAP54Q96N23 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CFAP54Q96N23 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CFAP54Q96N23 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CFAP54Q96N23 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
CFAP54Q96N23 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CFAP54Q96N23 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CFAP54Q96N23 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CFAP54Q96N23 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.21■□□□□ 0.67
CFAP54Q96N23 SPDYE15P-201ENST00000424157 909 ntBASIC19.21■□□□□ 0.67
CFAP54Q96N23 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CFAP54Q96N23 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
CFAP54Q96N23 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CFAP54Q96N23 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CFAP54Q96N23 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CFAP54Q96N23 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CFAP54Q96N23 LINC01311-201ENST00000565162 1445 ntBASIC19.21■□□□□ 0.67
CFAP54Q96N23 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CFAP54Q96N23 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CFAP54Q96N23 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CFAP54Q96N23 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CFAP54Q96N23 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.21■□□□□ 0.67
CFAP54Q96N23 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.21■□□□□ 0.67
CFAP54Q96N23 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.21■□□□□ 0.67
CFAP54Q96N23 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.21■□□□□ 0.67
CFAP54Q96N23 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CFAP54Q96N23 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CFAP54Q96N23 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CFAP54Q96N23 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
CFAP54Q96N23 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.2■□□□□ 0.66
CFAP54Q96N23 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.2■□□□□ 0.66
CFAP54Q96N23 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.2■□□□□ 0.66
CFAP54Q96N23 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.2■□□□□ 0.66
CFAP54Q96N23 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CFAP54Q96N23 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CFAP54Q96N23 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CFAP54Q96N23 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CFAP54Q96N23 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CFAP54Q96N23 STARP1-201ENST00000397973 869 ntBASIC19.2■□□□□ 0.66
CFAP54Q96N23 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.2■□□□□ 0.66
CFAP54Q96N23 TSPY19P-201ENST00000418461 509 ntBASIC19.2■□□□□ 0.66
CFAP54Q96N23 AC004980.1-204ENST00000429707 299 ntBASIC19.2■□□□□ 0.66
CFAP54Q96N23 TSPY18P-201ENST00000441642 509 ntBASIC19.2■□□□□ 0.66
CFAP54Q96N23 AL353719.1-201ENST00000566847 864 ntBASIC19.2■□□□□ 0.66
CFAP54Q96N23 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CFAP54Q96N23 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
CFAP54Q96N23 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CFAP54Q96N23 BX119927.1-201ENST00000636596 1552 ntBASIC19.2■□□□□ 0.66
CFAP54Q96N23 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CFAP54Q96N23 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
CFAP54Q96N23 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CFAP54Q96N23 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CFAP54Q96N23 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.19■□□□□ 0.66
CFAP54Q96N23 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CFAP54Q96N23 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CFAP54Q96N23 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CFAP54Q96N23 AL024507.2-201ENST00000606070 2574 ntBASIC19.19■□□□□ 0.66
CFAP54Q96N23 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.19■□□□□ 0.66
CFAP54Q96N23 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.19■□□□□ 0.66
CFAP54Q96N23 HLA-G-203ENST00000376818 1127 ntBASIC19.19■□□□□ 0.66
CFAP54Q96N23 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms