Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC25.17■■□□□ 1.62
ZNF428Q96B54 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
ZNF428Q96B54 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC25.16■■□□□ 1.62
ZNF428Q96B54 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ZNF428Q96B54 HTR7P1-201ENST00000538670 1336 ntBASIC25.16■■□□□ 1.62
ZNF428Q96B54 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ZNF428Q96B54 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
ZNF428Q96B54 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ZNF428Q96B54 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
ZNF428Q96B54 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
ZNF428Q96B54 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
ZNF428Q96B54 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ZNF428Q96B54 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
ZNF428Q96B54 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC25.16■■□□□ 1.62
ZNF428Q96B54 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
ZNF428Q96B54 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
ZNF428Q96B54 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
ZNF428Q96B54 SLC25A24-204ENST00000569674 2357 ntBASIC25.16■■□□□ 1.62
ZNF428Q96B54 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
ZNF428Q96B54 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
ZNF428Q96B54 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC25.15■■□□□ 1.62
ZNF428Q96B54 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
ZNF428Q96B54 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ZNF428Q96B54 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ZNF428Q96B54 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
ZNF428Q96B54 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
ZNF428Q96B54 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ZNF428Q96B54 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
ZNF428Q96B54 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ZNF428Q96B54 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
ZNF428Q96B54 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC25.15■■□□□ 1.62
ZNF428Q96B54 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
ZNF428Q96B54 BX088651.1-201ENST00000540551 451 ntBASIC25.15■■□□□ 1.62
ZNF428Q96B54 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC25.15■■□□□ 1.62
ZNF428Q96B54 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC25.15■■□□□ 1.62
ZNF428Q96B54 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
ZNF428Q96B54 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC25.15■■□□□ 1.62
ZNF428Q96B54 AC073912.3-201ENST00000624414 853 ntBASIC25.15■■□□□ 1.62
ZNF428Q96B54 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC25.15■■□□□ 1.62
ZNF428Q96B54 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
ZNF428Q96B54 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ZNF428Q96B54 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
ZNF428Q96B54 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
ZNF428Q96B54 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC25.14■■□□□ 1.62
ZNF428Q96B54 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
ZNF428Q96B54 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
ZNF428Q96B54 KRT8P8-201ENST00000434750 1448 ntBASIC25.14■■□□□ 1.62
ZNF428Q96B54 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC25.14■■□□□ 1.62
ZNF428Q96B54 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
ZNF428Q96B54 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
ZNF428Q96B54 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
ZNF428Q96B54 FAM197Y1-201ENST00000421178 764 ntBASIC25.14■■□□□ 1.62
ZNF428Q96B54 SAPCD2P4-201ENST00000424595 1171 ntBASIC25.14■■□□□ 1.62
ZNF428Q96B54 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
ZNF428Q96B54 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC25.14■■□□□ 1.61
ZNF428Q96B54 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC25.14■■□□□ 1.61
ZNF428Q96B54 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC25.14■■□□□ 1.61
ZNF428Q96B54 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
ZNF428Q96B54 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
ZNF428Q96B54 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
ZNF428Q96B54 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
ZNF428Q96B54 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC25.14■■□□□ 1.61
ZNF428Q96B54 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
ZNF428Q96B54 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
ZNF428Q96B54 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ZNF428Q96B54 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ZNF428Q96B54 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC25.13■■□□□ 1.61
ZNF428Q96B54 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ZNF428Q96B54 TUBB8P6-201ENST00000436895 1288 ntBASIC25.13■■□□□ 1.61
ZNF428Q96B54 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
ZNF428Q96B54 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC25.13■■□□□ 1.61
ZNF428Q96B54 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC25.13■■□□□ 1.61
ZNF428Q96B54 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
ZNF428Q96B54 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC25.13■■□□□ 1.61
ZNF428Q96B54 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ZNF428Q96B54 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ZNF428Q96B54 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ZNF428Q96B54 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
ZNF428Q96B54 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
ZNF428Q96B54 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
ZNF428Q96B54 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
ZNF428Q96B54 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
ZNF428Q96B54 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC25.12■■□□□ 1.61
ZNF428Q96B54 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC25.12■■□□□ 1.61
ZNF428Q96B54 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC25.12■■□□□ 1.61
ZNF428Q96B54 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC25.12■■□□□ 1.61
ZNF428Q96B54 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC25.12■■□□□ 1.61
ZNF428Q96B54 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC25.12■■□□□ 1.61
ZNF428Q96B54 AC004264.1-201ENST00000608354 794 ntBASIC25.12■■□□□ 1.61
ZNF428Q96B54 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC25.12■■□□□ 1.61
ZNF428Q96B54 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC25.12■■□□□ 1.61
ZNF428Q96B54 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
ZNF428Q96B54 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
ZNF428Q96B54 POLI-202ENST00000406285 2030 ntTSL 2 BASIC25.12■■□□□ 1.61
ZNF428Q96B54 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC25.12■■□□□ 1.61
ZNF428Q96B54 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC25.11■■□□□ 1.61
ZNF428Q96B54 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
ZNF428Q96B54 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ZNF428Q96B54 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
ZNF428Q96B54 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms