Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.87■□□□□ 0.93
SHC3Q92529 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SHC3Q92529 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.87■□□□□ 0.93
SHC3Q92529 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHC3Q92529 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHC3Q92529 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SHC3Q92529 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHC3Q92529 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SHC3Q92529 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SHC3Q92529 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SHC3Q92529 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHC3Q92529 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHC3Q92529 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHC3Q92529 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHC3Q92529 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SHC3Q92529 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHC3Q92529 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.86■□□□□ 0.93
SHC3Q92529 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SHC3Q92529 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.86■□□□□ 0.93
SHC3Q92529 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHC3Q92529 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.86■□□□□ 0.93
SHC3Q92529 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SHC3Q92529 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.86■□□□□ 0.93
SHC3Q92529 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.86■□□□□ 0.93
SHC3Q92529 AC069544.1-201ENST00000609399 999 ntBASIC20.86■□□□□ 0.93
SHC3Q92529 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHC3Q92529 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.86■□□□□ 0.93
SHC3Q92529 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHC3Q92529 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHC3Q92529 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHC3Q92529 ZNF815P-204ENST00000434898 1737 ntBASIC20.86■□□□□ 0.93
SHC3Q92529 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SHC3Q92529 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SHC3Q92529 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.85■□□□□ 0.93
SHC3Q92529 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHC3Q92529 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHC3Q92529 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHC3Q92529 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.85■□□□□ 0.93
SHC3Q92529 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.85■□□□□ 0.93
SHC3Q92529 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.85■□□□□ 0.93
SHC3Q92529 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.85■□□□□ 0.93
SHC3Q92529 AC233263.1-201ENST00000578059 224 ntBASIC20.85■□□□□ 0.93
SHC3Q92529 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.85■□□□□ 0.93
SHC3Q92529 MTDHP1-201ENST00000605323 784 ntBASIC20.85■□□□□ 0.93
SHC3Q92529 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.85■□□□□ 0.93
SHC3Q92529 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SHC3Q92529 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHC3Q92529 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHC3Q92529 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SHC3Q92529 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.85■□□□□ 0.93
SHC3Q92529 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.85■□□□□ 0.93
SHC3Q92529 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHC3Q92529 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SHC3Q92529 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHC3Q92529 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SHC3Q92529 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SHC3Q92529 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SHC3Q92529 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHC3Q92529 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.84■□□□□ 0.93
SHC3Q92529 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.84■□□□□ 0.93
SHC3Q92529 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.84■□□□□ 0.93
SHC3Q92529 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SHC3Q92529 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SHC3Q92529 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SHC3Q92529 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHC3Q92529 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHC3Q92529 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHC3Q92529 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHC3Q92529 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
SHC3Q92529 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.83■□□□□ 0.93
SHC3Q92529 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.83■□□□□ 0.93
SHC3Q92529 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHC3Q92529 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHC3Q92529 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SHC3Q92529 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SHC3Q92529 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SHC3Q92529 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SHC3Q92529 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.83■□□□□ 0.93
SHC3Q92529 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHC3Q92529 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.83■□□□□ 0.93
SHC3Q92529 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.83■□□□□ 0.93
SHC3Q92529 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SHC3Q92529 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.83■□□□□ 0.93
SHC3Q92529 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.83■□□□□ 0.93
SHC3Q92529 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHC3Q92529 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.83■□□□□ 0.93
SHC3Q92529 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
SHC3Q92529 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.83■□□□□ 0.93
SHC3Q92529 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.93
SHC3Q92529 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHC3Q92529 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SHC3Q92529 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SHC3Q92529 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SHC3Q92529 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SHC3Q92529 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SHC3Q92529 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHC3Q92529 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.82■□□□□ 0.92
SHC3Q92529 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.82■□□□□ 0.92
SHC3Q92529 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHC3Q92529 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms