Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX1Q92499 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
DDX1Q92499 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX1Q92499 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.83■□□□□ 0.93
DDX1Q92499 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX1Q92499 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX1Q92499 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX1Q92499 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.83■□□□□ 0.93
DDX1Q92499 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.83■□□□□ 0.93
DDX1Q92499 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.83■□□□□ 0.93
DDX1Q92499 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.83■□□□□ 0.93
DDX1Q92499 AL121829.2-201ENST00000620908 328 ntBASIC20.83■□□□□ 0.93
DDX1Q92499 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.83■□□□□ 0.93
DDX1Q92499 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX1Q92499 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DDX1Q92499 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DDX1Q92499 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
DDX1Q92499 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.83■□□□□ 0.92
DDX1Q92499 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
DDX1Q92499 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
DDX1Q92499 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX1Q92499 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX1Q92499 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.82■□□□□ 0.92
DDX1Q92499 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX1Q92499 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX1Q92499 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.82■□□□□ 0.92
DDX1Q92499 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX1Q92499 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
DDX1Q92499 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.82■□□□□ 0.92
DDX1Q92499 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DDX1Q92499 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.82■□□□□ 0.92
DDX1Q92499 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
DDX1Q92499 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DDX1Q92499 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.82■□□□□ 0.92
DDX1Q92499 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.82■□□□□ 0.92
DDX1Q92499 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX1Q92499 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.82■□□□□ 0.92
DDX1Q92499 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX1Q92499 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX1Q92499 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX1Q92499 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX1Q92499 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
DDX1Q92499 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.81■□□□□ 0.92
DDX1Q92499 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.81■□□□□ 0.92
DDX1Q92499 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX1Q92499 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX1Q92499 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.81■□□□□ 0.92
DDX1Q92499 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
DDX1Q92499 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.81■□□□□ 0.92
DDX1Q92499 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.81■□□□□ 0.92
DDX1Q92499 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.81■□□□□ 0.92
DDX1Q92499 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.81■□□□□ 0.92
DDX1Q92499 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDX1Q92499 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.81■□□□□ 0.92
DDX1Q92499 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.81■□□□□ 0.92
DDX1Q92499 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.81■□□□□ 0.92
DDX1Q92499 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
DDX1Q92499 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
DDX1Q92499 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX1Q92499 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
DDX1Q92499 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
DDX1Q92499 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
DDX1Q92499 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
DDX1Q92499 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX1Q92499 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.8■□□□□ 0.92
DDX1Q92499 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX1Q92499 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.8■□□□□ 0.92
DDX1Q92499 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX1Q92499 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DDX1Q92499 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX1Q92499 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX1Q92499 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DDX1Q92499 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX1Q92499 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
DDX1Q92499 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX1Q92499 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.8■□□□□ 0.92
DDX1Q92499 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DDX1Q92499 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.8■□□□□ 0.92
DDX1Q92499 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DDX1Q92499 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX1Q92499 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
DDX1Q92499 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX1Q92499 KRT18P21-201ENST00000515767 1272 ntBASIC20.8■□□□□ 0.92
DDX1Q92499 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.8■□□□□ 0.92
DDX1Q92499 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
DDX1Q92499 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.8■□□□□ 0.92
DDX1Q92499 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.8■□□□□ 0.92
DDX1Q92499 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.8■□□□□ 0.92
DDX1Q92499 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
DDX1Q92499 AL032819.2-201ENST00000624543 2162 ntBASIC20.8■□□□□ 0.92
DDX1Q92499 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX1Q92499 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX1Q92499 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DDX1Q92499 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.8■□□□□ 0.92
DDX1Q92499 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX1Q92499 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.8■□□□□ 0.92
DDX1Q92499 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX1Q92499 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX1Q92499 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DDX1Q92499 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms