Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAF3IP1Q8TDR0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
TRAF3IP1Q8TDR0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRAF3IP1Q8TDR0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.35■□□□□ 0.85
TRAF3IP1Q8TDR0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.35■□□□□ 0.85
TRAF3IP1Q8TDR0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
TRAF3IP1Q8TDR0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TRAF3IP1Q8TDR0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TRAF3IP1Q8TDR0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.35■□□□□ 0.85
TRAF3IP1Q8TDR0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.35■□□□□ 0.85
TRAF3IP1Q8TDR0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRAF3IP1Q8TDR0 AC098934.4-201ENST00000564127 592 ntBASIC20.35■□□□□ 0.85
TRAF3IP1Q8TDR0 AC133041.1-202ENST00000642053 222 ntBASIC20.35■□□□□ 0.85
TRAF3IP1Q8TDR0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TRAF3IP1Q8TDR0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.35■□□□□ 0.85
TRAF3IP1Q8TDR0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAF3IP1Q8TDR0 AC093484.2-201ENST00000580996 2166 ntBASIC20.35■□□□□ 0.85
TRAF3IP1Q8TDR0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAF3IP1Q8TDR0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAF3IP1Q8TDR0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.35■□□□□ 0.85
TRAF3IP1Q8TDR0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAF3IP1Q8TDR0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
TRAF3IP1Q8TDR0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAF3IP1Q8TDR0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAF3IP1Q8TDR0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.34■□□□□ 0.85
TRAF3IP1Q8TDR0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAF3IP1Q8TDR0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAF3IP1Q8TDR0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAF3IP1Q8TDR0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAF3IP1Q8TDR0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAF3IP1Q8TDR0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.34■□□□□ 0.85
TRAF3IP1Q8TDR0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TRAF3IP1Q8TDR0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.34■□□□□ 0.85
TRAF3IP1Q8TDR0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.34■□□□□ 0.85
TRAF3IP1Q8TDR0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.34■□□□□ 0.85
TRAF3IP1Q8TDR0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.34■□□□□ 0.85
TRAF3IP1Q8TDR0 AC060766.5-201ENST00000590539 871 ntBASIC20.34■□□□□ 0.85
TRAF3IP1Q8TDR0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.34■□□□□ 0.85
TRAF3IP1Q8TDR0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAF3IP1Q8TDR0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TRAF3IP1Q8TDR0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAF3IP1Q8TDR0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.34■□□□□ 0.85
TRAF3IP1Q8TDR0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAF3IP1Q8TDR0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
TRAF3IP1Q8TDR0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAF3IP1Q8TDR0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAF3IP1Q8TDR0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAF3IP1Q8TDR0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAF3IP1Q8TDR0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAF3IP1Q8TDR0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAF3IP1Q8TDR0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.34■□□□□ 0.85
TRAF3IP1Q8TDR0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TRAF3IP1Q8TDR0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.33■□□□□ 0.85
TRAF3IP1Q8TDR0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAF3IP1Q8TDR0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.33■□□□□ 0.85
TRAF3IP1Q8TDR0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAF3IP1Q8TDR0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.33■□□□□ 0.85
TRAF3IP1Q8TDR0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAF3IP1Q8TDR0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAF3IP1Q8TDR0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAF3IP1Q8TDR0 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.33■□□□□ 0.85
TRAF3IP1Q8TDR0 PNMA6B-201ENST00000538162 1200 ntBASIC20.33■□□□□ 0.85
TRAF3IP1Q8TDR0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.33■□□□□ 0.85
TRAF3IP1Q8TDR0 AC104771.1-201ENST00000603335 964 ntBASIC20.33■□□□□ 0.85
TRAF3IP1Q8TDR0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
TRAF3IP1Q8TDR0 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRAF3IP1Q8TDR0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRAF3IP1Q8TDR0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRAF3IP1Q8TDR0 TFP1-202ENST00000475455 1573 ntBASIC20.33■□□□□ 0.84
TRAF3IP1Q8TDR0 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
TRAF3IP1Q8TDR0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRAF3IP1Q8TDR0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TRAF3IP1Q8TDR0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAF3IP1Q8TDR0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAF3IP1Q8TDR0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAF3IP1Q8TDR0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAF3IP1Q8TDR0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
TRAF3IP1Q8TDR0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.32■□□□□ 0.84
TRAF3IP1Q8TDR0 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAF3IP1Q8TDR0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRAF3IP1Q8TDR0 AC069152.1-201ENST00000438030 544 ntBASIC20.32■□□□□ 0.84
TRAF3IP1Q8TDR0 RPS2P52-201ENST00000469610 820 ntBASIC20.32■□□□□ 0.84
TRAF3IP1Q8TDR0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.32■□□□□ 0.84
TRAF3IP1Q8TDR0 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.32■□□□□ 0.84
TRAF3IP1Q8TDR0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.32■□□□□ 0.84
TRAF3IP1Q8TDR0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.32■□□□□ 0.84
TRAF3IP1Q8TDR0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAF3IP1Q8TDR0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAF3IP1Q8TDR0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.32■□□□□ 0.84
TRAF3IP1Q8TDR0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRAF3IP1Q8TDR0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAF3IP1Q8TDR0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAF3IP1Q8TDR0 AC124283.5-201ENST00000624661 1809 ntBASIC20.32■□□□□ 0.84
TRAF3IP1Q8TDR0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TRAF3IP1Q8TDR0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRAF3IP1Q8TDR0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAF3IP1Q8TDR0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.31■□□□□ 0.84
TRAF3IP1Q8TDR0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.31■□□□□ 0.84
TRAF3IP1Q8TDR0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.31■□□□□ 0.84
TRAF3IP1Q8TDR0 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms