Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ALMS1Q8TCU4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ALMS1Q8TCU4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ALMS1Q8TCU4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ALMS1Q8TCU4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.23□□□□□ -0.29
ALMS1Q8TCU4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
ALMS1Q8TCU4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC13.23□□□□□ -0.29
ALMS1Q8TCU4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ALMS1Q8TCU4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ALMS1Q8TCU4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
ALMS1Q8TCU4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
ALMS1Q8TCU4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC13.23□□□□□ -0.29
ALMS1Q8TCU4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
ALMS1Q8TCU4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ALMS1Q8TCU4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC13.22□□□□□ -0.29
ALMS1Q8TCU4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.22□□□□□ -0.29
ALMS1Q8TCU4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.22□□□□□ -0.29
ALMS1Q8TCU4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
ALMS1Q8TCU4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.22□□□□□ -0.29
ALMS1Q8TCU4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ALMS1Q8TCU4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
ALMS1Q8TCU4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ALMS1Q8TCU4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ALMS1Q8TCU4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC13.22□□□□□ -0.29
ALMS1Q8TCU4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ALMS1Q8TCU4 KRT18P1-202ENST00000452408 1331 ntBASIC13.22□□□□□ -0.29
ALMS1Q8TCU4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
ALMS1Q8TCU4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ALMS1Q8TCU4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ALMS1Q8TCU4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ALMS1Q8TCU4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
ALMS1Q8TCU4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ALMS1Q8TCU4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ALMS1Q8TCU4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC13.22□□□□□ -0.29
ALMS1Q8TCU4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ALMS1Q8TCU4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ALMS1Q8TCU4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ALMS1Q8TCU4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC13.22□□□□□ -0.29
ALMS1Q8TCU4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC13.21□□□□□ -0.29
ALMS1Q8TCU4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ALMS1Q8TCU4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC13.21□□□□□ -0.29
ALMS1Q8TCU4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ALMS1Q8TCU4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ALMS1Q8TCU4 AC242852.2-201ENST00000615738 1807 ntBASIC13.21□□□□□ -0.29
ALMS1Q8TCU4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC13.21□□□□□ -0.29
ALMS1Q8TCU4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
ALMS1Q8TCU4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
ALMS1Q8TCU4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ALMS1Q8TCU4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ALMS1Q8TCU4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.21□□□□□ -0.29
ALMS1Q8TCU4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ALMS1Q8TCU4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC13.21□□□□□ -0.29
ALMS1Q8TCU4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
ALMS1Q8TCU4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ALMS1Q8TCU4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ALMS1Q8TCU4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ALMS1Q8TCU4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
ALMS1Q8TCU4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ALMS1Q8TCU4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC13.21□□□□□ -0.3
ALMS1Q8TCU4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
ALMS1Q8TCU4 AC004870.1-201ENST00000315132 882 ntBASIC13.21□□□□□ -0.3
ALMS1Q8TCU4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.3
ALMS1Q8TCU4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ALMS1Q8TCU4 CA15P1-201ENST00000481698 905 ntBASIC13.21□□□□□ -0.3
ALMS1Q8TCU4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ALMS1Q8TCU4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC13.2□□□□□ -0.3
ALMS1Q8TCU4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ALMS1Q8TCU4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ALMS1Q8TCU4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
ALMS1Q8TCU4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC13.2□□□□□ -0.3
ALMS1Q8TCU4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ALMS1Q8TCU4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ALMS1Q8TCU4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ALMS1Q8TCU4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
ALMS1Q8TCU4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ALMS1Q8TCU4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
ALMS1Q8TCU4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ALMS1Q8TCU4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC13.2□□□□□ -0.3
ALMS1Q8TCU4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC13.2□□□□□ -0.3
ALMS1Q8TCU4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ALMS1Q8TCU4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.2□□□□□ -0.3
ALMS1Q8TCU4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ALMS1Q8TCU4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC13.2□□□□□ -0.3
ALMS1Q8TCU4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ALMS1Q8TCU4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ALMS1Q8TCU4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ALMS1Q8TCU4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC13.2□□□□□ -0.3
ALMS1Q8TCU4 TMEM179-206ENST00000616017 1645 ntBASIC13.2□□□□□ -0.3
ALMS1Q8TCU4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALMS1Q8TCU4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALMS1Q8TCU4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALMS1Q8TCU4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC13.19□□□□□ -0.3
ALMS1Q8TCU4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALMS1Q8TCU4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
ALMS1Q8TCU4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC13.19□□□□□ -0.3
ALMS1Q8TCU4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALMS1Q8TCU4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALMS1Q8TCU4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC13.19□□□□□ -0.3
ALMS1Q8TCU4 HBZP1-201ENST00000354915 429 ntBASIC13.19□□□□□ -0.3
ALMS1Q8TCU4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms