Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC01006Q8NI28 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LINC01006Q8NI28 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC01006Q8NI28 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC01006Q8NI28 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC01006Q8NI28 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC01006Q8NI28 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC01006Q8NI28 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINC01006Q8NI28 FAM8A6P-201ENST00000407496 1135 ntBASIC15.24■□□□□ 0.03
LINC01006Q8NI28 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINC01006Q8NI28 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC01006Q8NI28 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC01006Q8NI28 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.24■□□□□ 0.03
LINC01006Q8NI28 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC01006Q8NI28 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINC01006Q8NI28 ME2-216ENST00000639850 2331 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC01006Q8NI28 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC01006Q8NI28 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
LINC01006Q8NI28 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LINC01006Q8NI28 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINC01006Q8NI28 AP001271.2-201ENST00000624018 1556 ntBASIC15.24■□□□□ 0.03
LINC01006Q8NI28 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01006Q8NI28 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01006Q8NI28 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
LINC01006Q8NI28 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01006Q8NI28 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
LINC01006Q8NI28 TSPY5P-201ENST00000426936 936 ntBASIC15.23■□□□□ 0.03
LINC01006Q8NI28 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.23■□□□□ 0.03
LINC01006Q8NI28 TSPY17P-201ENST00000450329 467 ntBASIC15.23■□□□□ 0.03
LINC01006Q8NI28 COX11P1-201ENST00000489116 835 ntBASIC15.23■□□□□ 0.03
LINC01006Q8NI28 YBX1P2-201ENST00000489612 999 ntBASIC15.23■□□□□ 0.03
LINC01006Q8NI28 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LINC01006Q8NI28 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.23■□□□□ 0.03
LINC01006Q8NI28 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC01006Q8NI28 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01006Q8NI28 AC091076.1-201ENST00000610741 619 ntBASIC15.23■□□□□ 0.03
LINC01006Q8NI28 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01006Q8NI28 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01006Q8NI28 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.23■□□□□ 0.03
LINC01006Q8NI28 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC01006Q8NI28 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01006Q8NI28 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LINC01006Q8NI28 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC01006Q8NI28 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01006Q8NI28 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC01006Q8NI28 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01006Q8NI28 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC01006Q8NI28 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01006Q8NI28 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01006Q8NI28 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01006Q8NI28 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01006Q8NI28 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC01006Q8NI28 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01006Q8NI28 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.22■□□□□ 0.03
LINC01006Q8NI28 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01006Q8NI28 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC01006Q8NI28 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.22■□□□□ 0.03
LINC01006Q8NI28 AL023803.3-201ENST00000615559 522 ntBASIC15.22■□□□□ 0.03
LINC01006Q8NI28 AL358472.4-201ENST00000633140 710 ntBASIC15.22■□□□□ 0.03
LINC01006Q8NI28 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.22■□□□□ 0.03
LINC01006Q8NI28 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LINC01006Q8NI28 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01006Q8NI28 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01006Q8NI28 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01006Q8NI28 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LINC01006Q8NI28 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01006Q8NI28 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01006Q8NI28 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01006Q8NI28 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01006Q8NI28 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC15.21■□□□□ 0.03
LINC01006Q8NI28 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.21■□□□□ 0.03
LINC01006Q8NI28 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01006Q8NI28 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01006Q8NI28 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01006Q8NI28 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01006Q8NI28 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01006Q8NI28 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01006Q8NI28 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01006Q8NI28 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01006Q8NI28 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.21■□□□□ 0.03
LINC01006Q8NI28 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01006Q8NI28 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.21■□□□□ 0.03
LINC01006Q8NI28 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.21■□□□□ 0.03
LINC01006Q8NI28 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.21■□□□□ 0.03
LINC01006Q8NI28 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.21■□□□□ 0.03
LINC01006Q8NI28 AC092647.4-201ENST00000457211 535 ntBASIC15.21■□□□□ 0.03
LINC01006Q8NI28 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01006Q8NI28 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01006Q8NI28 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.21■□□□□ 0.03
LINC01006Q8NI28 AL353719.1-201ENST00000566847 864 ntBASIC15.21■□□□□ 0.03
LINC01006Q8NI28 AL512604.3-201ENST00000569583 964 ntBASIC15.21■□□□□ 0.03
LINC01006Q8NI28 AC141257.4-201ENST00000634557 245 ntBASIC15.21■□□□□ 0.03
LINC01006Q8NI28 AC136944.6-201ENST00000634818 245 ntBASIC15.21■□□□□ 0.03
LINC01006Q8NI28 MYC-208ENST00000641036 567 ntBASIC15.21■□□□□ 0.03
LINC01006Q8NI28 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
LINC01006Q8NI28 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01006Q8NI28 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
LINC01006Q8NI28 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LINC01006Q8NI28 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LINC01006Q8NI28 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms