Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DNAAF1Q8NEP3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DNAAF1Q8NEP3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
DNAAF1Q8NEP3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DNAAF1Q8NEP3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.17■□□□□ 0.34
DNAAF1Q8NEP3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DNAAF1Q8NEP3 CNN2P6-201ENST00000439038 900 ntBASIC17.17■□□□□ 0.34
DNAAF1Q8NEP3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DNAAF1Q8NEP3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
DNAAF1Q8NEP3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.17■□□□□ 0.34
DNAAF1Q8NEP3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DNAAF1Q8NEP3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
DNAAF1Q8NEP3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
DNAAF1Q8NEP3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.17■□□□□ 0.34
DNAAF1Q8NEP3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DNAAF1Q8NEP3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DNAAF1Q8NEP3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.16■□□□□ 0.34
DNAAF1Q8NEP3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DNAAF1Q8NEP3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
DNAAF1Q8NEP3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DNAAF1Q8NEP3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DNAAF1Q8NEP3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
DNAAF1Q8NEP3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DNAAF1Q8NEP3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DNAAF1Q8NEP3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.16■□□□□ 0.34
DNAAF1Q8NEP3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.16■□□□□ 0.34
DNAAF1Q8NEP3 AC026271.2-201ENST00000428091 497 ntBASIC17.16■□□□□ 0.34
DNAAF1Q8NEP3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DNAAF1Q8NEP3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DNAAF1Q8NEP3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.16■□□□□ 0.34
DNAAF1Q8NEP3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.16■□□□□ 0.34
DNAAF1Q8NEP3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.16■□□□□ 0.34
DNAAF1Q8NEP3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.16■□□□□ 0.34
DNAAF1Q8NEP3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
DNAAF1Q8NEP3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
DNAAF1Q8NEP3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DNAAF1Q8NEP3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DNAAF1Q8NEP3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.15■□□□□ 0.34
DNAAF1Q8NEP3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DNAAF1Q8NEP3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
DNAAF1Q8NEP3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DNAAF1Q8NEP3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DNAAF1Q8NEP3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DNAAF1Q8NEP3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.15■□□□□ 0.34
DNAAF1Q8NEP3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
DNAAF1Q8NEP3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.15■□□□□ 0.34
DNAAF1Q8NEP3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DNAAF1Q8NEP3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.15■□□□□ 0.34
DNAAF1Q8NEP3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.15■□□□□ 0.34
DNAAF1Q8NEP3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DNAAF1Q8NEP3 AC069236.1-201ENST00000604339 616 ntBASIC17.15■□□□□ 0.34
DNAAF1Q8NEP3 AC011767.1-201ENST00000617410 1153 ntBASIC17.15■□□□□ 0.34
DNAAF1Q8NEP3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.15■□□□□ 0.34
DNAAF1Q8NEP3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
DNAAF1Q8NEP3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DNAAF1Q8NEP3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
DNAAF1Q8NEP3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
DNAAF1Q8NEP3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DNAAF1Q8NEP3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DNAAF1Q8NEP3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DNAAF1Q8NEP3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DNAAF1Q8NEP3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.15■□□□□ 0.34
DNAAF1Q8NEP3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
DNAAF1Q8NEP3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.15■□□□□ 0.34
DNAAF1Q8NEP3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 KRT8P17-201ENST00000453110 1448 ntBASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 KRT18P68-201ENST00000392293 1000 ntBASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 AC105020.6-201ENST00000621523 1217 ntBASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 AC231657.2-201ENST00000624556 255 ntBASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms