Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TTC9CQ8N5M4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TTC9CQ8N5M4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TTC9CQ8N5M4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TTC9CQ8N5M4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TTC9CQ8N5M4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.44■□□□□ 0.06
TTC9CQ8N5M4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TTC9CQ8N5M4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC15.44■□□□□ 0.06
TTC9CQ8N5M4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
TTC9CQ8N5M4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TTC9CQ8N5M4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TTC9CQ8N5M4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
TTC9CQ8N5M4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.44■□□□□ 0.06
TTC9CQ8N5M4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TTC9CQ8N5M4 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.44■□□□□ 0.06
TTC9CQ8N5M4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.44■□□□□ 0.06
TTC9CQ8N5M4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
TTC9CQ8N5M4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC15.44■□□□□ 0.06
TTC9CQ8N5M4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TTC9CQ8N5M4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC15.44■□□□□ 0.06
TTC9CQ8N5M4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.44■□□□□ 0.06
TTC9CQ8N5M4 UNC93B5-201ENST00000530315 699 ntBASIC15.44■□□□□ 0.06
TTC9CQ8N5M4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TTC9CQ8N5M4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
TTC9CQ8N5M4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TTC9CQ8N5M4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TTC9CQ8N5M4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TTC9CQ8N5M4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TTC9CQ8N5M4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TTC9CQ8N5M4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.44■□□□□ 0.06
TTC9CQ8N5M4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15.44■□□□□ 0.06
TTC9CQ8N5M4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TTC9CQ8N5M4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.44■□□□□ 0.06
TTC9CQ8N5M4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TTC9CQ8N5M4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9CQ8N5M4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC15.42■□□□□ 0.06
TTC9CQ8N5M4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9CQ8N5M4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9CQ8N5M4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TTC9CQ8N5M4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TTC9CQ8N5M4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9CQ8N5M4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9CQ8N5M4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9CQ8N5M4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.42■□□□□ 0.06
TTC9CQ8N5M4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9CQ8N5M4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9CQ8N5M4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC15.42■□□□□ 0.06
TTC9CQ8N5M4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9CQ8N5M4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.42■□□□□ 0.06
TTC9CQ8N5M4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TTC9CQ8N5M4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.42■□□□□ 0.06
TTC9CQ8N5M4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9CQ8N5M4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
TTC9CQ8N5M4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9CQ8N5M4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.42■□□□□ 0.06
TTC9CQ8N5M4 AP006587.1-201ENST00000534129 1502 ntBASIC15.42■□□□□ 0.06
TTC9CQ8N5M4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9CQ8N5M4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9CQ8N5M4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC15.42■□□□□ 0.06
TTC9CQ8N5M4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC15.42■□□□□ 0.06
TTC9CQ8N5M4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9CQ8N5M4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms