Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 CD177P1-201ENST00000606252 935 ntBASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 FAM197Y1-201ENST00000421178 764 ntBASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
ARHGEF39Q8N4T4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.48■□□□□ 0.55
ARHGEF39Q8N4T4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARHGEF39Q8N4T4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ARHGEF39Q8N4T4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
ARHGEF39Q8N4T4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARHGEF39Q8N4T4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARHGEF39Q8N4T4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.48■□□□□ 0.55
ARHGEF39Q8N4T4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.48■□□□□ 0.55
ARHGEF39Q8N4T4 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.48■□□□□ 0.55
ARHGEF39Q8N4T4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.48■□□□□ 0.55
ARHGEF39Q8N4T4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.48■□□□□ 0.55
ARHGEF39Q8N4T4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.48■□□□□ 0.55
ARHGEF39Q8N4T4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.48■□□□□ 0.55
ARHGEF39Q8N4T4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.48■□□□□ 0.55
ARHGEF39Q8N4T4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ARHGEF39Q8N4T4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARHGEF39Q8N4T4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ARHGEF39Q8N4T4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ARHGEF39Q8N4T4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ARHGEF39Q8N4T4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARHGEF39Q8N4T4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARHGEF39Q8N4T4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
ARHGEF39Q8N4T4 AC004980.1-204ENST00000429707 299 ntBASIC18.47■□□□□ 0.55
ARHGEF39Q8N4T4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARHGEF39Q8N4T4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.47■□□□□ 0.55
ARHGEF39Q8N4T4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.47■□□□□ 0.55
ARHGEF39Q8N4T4 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.47■□□□□ 0.55
ARHGEF39Q8N4T4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARHGEF39Q8N4T4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.47■□□□□ 0.55
ARHGEF39Q8N4T4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARHGEF39Q8N4T4 TREX1-205ENST00000625293 1783 ntBASIC18.47■□□□□ 0.55
ARHGEF39Q8N4T4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ARHGEF39Q8N4T4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ARHGEF39Q8N4T4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARHGEF39Q8N4T4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARHGEF39Q8N4T4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ARHGEF39Q8N4T4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ARHGEF39Q8N4T4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.46■□□□□ 0.55
ARHGEF39Q8N4T4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ARHGEF39Q8N4T4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ARHGEF39Q8N4T4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ARHGEF39Q8N4T4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
ARHGEF39Q8N4T4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ARHGEF39Q8N4T4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ARHGEF39Q8N4T4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ARHGEF39Q8N4T4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ARHGEF39Q8N4T4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ARHGEF39Q8N4T4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.46■□□□□ 0.55
ARHGEF39Q8N4T4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ARHGEF39Q8N4T4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.46■□□□□ 0.55
ARHGEF39Q8N4T4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.46■□□□□ 0.55
ARHGEF39Q8N4T4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.46■□□□□ 0.55
ARHGEF39Q8N4T4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms