Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
CDKL3Q8IVW4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.08■□□□□ 0.81
CDKL3Q8IVW4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDKL3Q8IVW4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDKL3Q8IVW4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDKL3Q8IVW4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.08■□□□□ 0.81
CDKL3Q8IVW4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDKL3Q8IVW4 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.08■□□□□ 0.81
CDKL3Q8IVW4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.08■□□□□ 0.81
CDKL3Q8IVW4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CDKL3Q8IVW4 AC133041.1-202ENST00000642053 222 ntBASIC20.08■□□□□ 0.81
CDKL3Q8IVW4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CDKL3Q8IVW4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
CDKL3Q8IVW4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDKL3Q8IVW4 AL032819.2-201ENST00000624543 2162 ntBASIC20.08■□□□□ 0.8
CDKL3Q8IVW4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDKL3Q8IVW4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CDKL3Q8IVW4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKL3Q8IVW4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKL3Q8IVW4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.07■□□□□ 0.8
CDKL3Q8IVW4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDKL3Q8IVW4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.07■□□□□ 0.8
CDKL3Q8IVW4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDKL3Q8IVW4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.07■□□□□ 0.8
CDKL3Q8IVW4 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.07■□□□□ 0.8
CDKL3Q8IVW4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
CDKL3Q8IVW4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.07■□□□□ 0.8
CDKL3Q8IVW4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CDKL3Q8IVW4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKL3Q8IVW4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.06■□□□□ 0.8
CDKL3Q8IVW4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CDKL3Q8IVW4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKL3Q8IVW4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CDKL3Q8IVW4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKL3Q8IVW4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.06■□□□□ 0.8
CDKL3Q8IVW4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CDKL3Q8IVW4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKL3Q8IVW4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKL3Q8IVW4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKL3Q8IVW4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CDKL3Q8IVW4 AC069152.1-201ENST00000438030 544 ntBASIC20.06■□□□□ 0.8
CDKL3Q8IVW4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.06■□□□□ 0.8
CDKL3Q8IVW4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.06■□□□□ 0.8
CDKL3Q8IVW4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.06■□□□□ 0.8
CDKL3Q8IVW4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.06■□□□□ 0.8
CDKL3Q8IVW4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
CDKL3Q8IVW4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKL3Q8IVW4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKL3Q8IVW4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKL3Q8IVW4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.06■□□□□ 0.8
CDKL3Q8IVW4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKL3Q8IVW4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKL3Q8IVW4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDKL3Q8IVW4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDKL3Q8IVW4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDKL3Q8IVW4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDKL3Q8IVW4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CDKL3Q8IVW4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.05■□□□□ 0.8
CDKL3Q8IVW4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDKL3Q8IVW4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CDKL3Q8IVW4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CDKL3Q8IVW4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDKL3Q8IVW4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDKL3Q8IVW4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDKL3Q8IVW4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.05■□□□□ 0.8
CDKL3Q8IVW4 AC104771.1-201ENST00000603335 964 ntBASIC20.05■□□□□ 0.8
CDKL3Q8IVW4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CDKL3Q8IVW4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDKL3Q8IVW4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDKL3Q8IVW4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.05■□□□□ 0.8
CDKL3Q8IVW4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDKL3Q8IVW4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.05■□□□□ 0.8
CDKL3Q8IVW4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDKL3Q8IVW4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDKL3Q8IVW4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CDKL3Q8IVW4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDKL3Q8IVW4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CDKL3Q8IVW4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDKL3Q8IVW4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDKL3Q8IVW4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDKL3Q8IVW4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.04■□□□□ 0.8
CDKL3Q8IVW4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.04■□□□□ 0.8
CDKL3Q8IVW4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.04■□□□□ 0.8
CDKL3Q8IVW4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDKL3Q8IVW4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.04■□□□□ 0.8
CDKL3Q8IVW4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.04■□□□□ 0.8
CDKL3Q8IVW4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.04■□□□□ 0.8
CDKL3Q8IVW4 SOX15-203ENST00000570788 1093 ntBASIC20.04■□□□□ 0.8
CDKL3Q8IVW4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDKL3Q8IVW4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDKL3Q8IVW4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDKL3Q8IVW4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.04■□□□□ 0.8
CDKL3Q8IVW4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.04■□□□□ 0.8
CDKL3Q8IVW4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.03■□□□□ 0.8
CDKL3Q8IVW4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.03■□□□□ 0.8
CDKL3Q8IVW4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDKL3Q8IVW4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDKL3Q8IVW4 AP006587.1-201ENST00000534129 1502 ntBASIC20.03■□□□□ 0.8
CDKL3Q8IVW4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.03■□□□□ 0.8
CDKL3Q8IVW4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms