Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
SYVN1Q86TM6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.2■□□□□ 0.66
SYVN1Q86TM6 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SYVN1Q86TM6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYVN1Q86TM6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYVN1Q86TM6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYVN1Q86TM6 AL596275.1-201ENST00000423464 877 ntBASIC19.2■□□□□ 0.66
SYVN1Q86TM6 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.2■□□□□ 0.66
SYVN1Q86TM6 RPPH1-201ENST00000516869 333 ntBASIC19.2■□□□□ 0.66
SYVN1Q86TM6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.2■□□□□ 0.66
SYVN1Q86TM6 AC023632.3-201ENST00000521633 145 ntBASIC19.2■□□□□ 0.66
SYVN1Q86TM6 C1QBPP2-201ENST00000528754 825 ntBASIC19.2■□□□□ 0.66
SYVN1Q86TM6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.2■□□□□ 0.66
SYVN1Q86TM6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.2■□□□□ 0.66
SYVN1Q86TM6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYVN1Q86TM6 PHGDH-210ENST00000641115 1638 ntBASIC19.2■□□□□ 0.66
SYVN1Q86TM6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYVN1Q86TM6 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.2■□□□□ 0.66
SYVN1Q86TM6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYVN1Q86TM6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SYVN1Q86TM6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYVN1Q86TM6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SYVN1Q86TM6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYVN1Q86TM6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYVN1Q86TM6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.2■□□□□ 0.66
SYVN1Q86TM6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SYVN1Q86TM6 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SYVN1Q86TM6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.19■□□□□ 0.66
SYVN1Q86TM6 AC098818.2-201ENST00000564925 2320 ntBASIC19.19■□□□□ 0.66
SYVN1Q86TM6 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYVN1Q86TM6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.19■□□□□ 0.66
SYVN1Q86TM6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SYVN1Q86TM6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYVN1Q86TM6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SYVN1Q86TM6 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
SYVN1Q86TM6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYVN1Q86TM6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.19■□□□□ 0.66
SYVN1Q86TM6 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYVN1Q86TM6 MIR718-201ENST00000390190 70 ntBASIC19.19■□□□□ 0.66
SYVN1Q86TM6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
SYVN1Q86TM6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SYVN1Q86TM6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.19■□□□□ 0.66
SYVN1Q86TM6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.19■□□□□ 0.66
SYVN1Q86TM6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.19■□□□□ 0.66
SYVN1Q86TM6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.19■□□□□ 0.66
SYVN1Q86TM6 RN7SL471P-201ENST00000580476 299 ntBASIC19.19■□□□□ 0.66
SYVN1Q86TM6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.19■□□□□ 0.66
SYVN1Q86TM6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.19■□□□□ 0.66
SYVN1Q86TM6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.19■□□□□ 0.66
SYVN1Q86TM6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SYVN1Q86TM6 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
SYVN1Q86TM6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
SYVN1Q86TM6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
SYVN1Q86TM6 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SYVN1Q86TM6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.18■□□□□ 0.66
SYVN1Q86TM6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.18■□□□□ 0.66
SYVN1Q86TM6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYVN1Q86TM6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.18■□□□□ 0.66
SYVN1Q86TM6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SYVN1Q86TM6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.18■□□□□ 0.66
SYVN1Q86TM6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SYVN1Q86TM6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYVN1Q86TM6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.18■□□□□ 0.66
SYVN1Q86TM6 AC069544.1-201ENST00000609399 999 ntBASIC19.18■□□□□ 0.66
SYVN1Q86TM6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SYVN1Q86TM6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.18■□□□□ 0.66
SYVN1Q86TM6 BX323043.1-201ENST00000641006 1765 ntBASIC19.18■□□□□ 0.66
SYVN1Q86TM6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.18■□□□□ 0.66
SYVN1Q86TM6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYVN1Q86TM6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYVN1Q86TM6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYVN1Q86TM6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SYVN1Q86TM6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
SYVN1Q86TM6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYVN1Q86TM6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.18■□□□□ 0.66
SYVN1Q86TM6 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SYVN1Q86TM6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYVN1Q86TM6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SYVN1Q86TM6 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYVN1Q86TM6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYVN1Q86TM6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SYVN1Q86TM6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.17■□□□□ 0.66
SYVN1Q86TM6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SYVN1Q86TM6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.17■□□□□ 0.66
SYVN1Q86TM6 POM121L13P-201ENST00000422362 380 ntBASIC19.17■□□□□ 0.66
SYVN1Q86TM6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SYVN1Q86TM6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SYVN1Q86TM6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
SYVN1Q86TM6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYVN1Q86TM6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYVN1Q86TM6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SYVN1Q86TM6 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYVN1Q86TM6 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYVN1Q86TM6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SYVN1Q86TM6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYVN1Q86TM6 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
SYVN1Q86TM6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SYVN1Q86TM6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYVN1Q86TM6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYVN1Q86TM6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms