Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC29.87■■■□□ 2.37
CD109Q6YHK3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CD109Q6YHK3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CD109Q6YHK3 EMBP1-201ENST00000458200 901 ntBASIC29.87■■■□□ 2.37
CD109Q6YHK3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC29.87■■■□□ 2.37
CD109Q6YHK3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC29.87■■■□□ 2.37
CD109Q6YHK3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CD109Q6YHK3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CD109Q6YHK3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CD109Q6YHK3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CD109Q6YHK3 KRT8P41-201ENST00000533985 1514 ntBASIC29.86■■■□□ 2.37
CD109Q6YHK3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CD109Q6YHK3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CD109Q6YHK3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CD109Q6YHK3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
CD109Q6YHK3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC29.86■■■□□ 2.37
CD109Q6YHK3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC29.86■■■□□ 2.37
CD109Q6YHK3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
CD109Q6YHK3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CD109Q6YHK3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
CD109Q6YHK3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CD109Q6YHK3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC29.85■■■□□ 2.37
CD109Q6YHK3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
CD109Q6YHK3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC29.85■■■□□ 2.37
CD109Q6YHK3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
CD109Q6YHK3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CD109Q6YHK3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC29.85■■■□□ 2.37
CD109Q6YHK3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC29.85■■■□□ 2.37
CD109Q6YHK3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC29.85■■■□□ 2.37
CD109Q6YHK3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC29.85■■■□□ 2.37
CD109Q6YHK3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC29.85■■■□□ 2.37
CD109Q6YHK3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CD109Q6YHK3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CD109Q6YHK3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC29.84■■■□□ 2.37
CD109Q6YHK3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CD109Q6YHK3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC29.84■■■□□ 2.37
CD109Q6YHK3 NUS1P1-201ENST00000446295 882 ntBASIC29.84■■■□□ 2.37
CD109Q6YHK3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC29.84■■■□□ 2.37
CD109Q6YHK3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
CD109Q6YHK3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC29.84■■■□□ 2.37
CD109Q6YHK3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC29.84■■■□□ 2.37
CD109Q6YHK3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
CD109Q6YHK3 AL121672.3-201ENST00000608644 468 ntBASIC29.84■■■□□ 2.37
CD109Q6YHK3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC29.84■■■□□ 2.37
CD109Q6YHK3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
CD109Q6YHK3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC29.84■■■□□ 2.37
CD109Q6YHK3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC29.83■■■□□ 2.37
CD109Q6YHK3 GUSBP5-202ENST00000510805 1989 ntBASIC29.83■■■□□ 2.37
CD109Q6YHK3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC29.83■■■□□ 2.37
CD109Q6YHK3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC29.83■■■□□ 2.37
CD109Q6YHK3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CD109Q6YHK3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC29.83■■■□□ 2.37
CD109Q6YHK3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC29.83■■■□□ 2.37
CD109Q6YHK3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC29.83■■■□□ 2.37
CD109Q6YHK3 BX119927.1-201ENST00000636596 1552 ntBASIC29.83■■■□□ 2.37
CD109Q6YHK3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
CD109Q6YHK3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC29.82■■■□□ 2.36
CD109Q6YHK3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
CD109Q6YHK3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CD109Q6YHK3 AC079781.3-201ENST00000449110 356 ntBASIC29.82■■■□□ 2.36
CD109Q6YHK3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC29.82■■■□□ 2.36
CD109Q6YHK3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC29.82■■■□□ 2.36
CD109Q6YHK3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CD109Q6YHK3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CD109Q6YHK3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CD109Q6YHK3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CD109Q6YHK3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC29.82■■■□□ 2.36
CD109Q6YHK3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC29.82■■■□□ 2.36
CD109Q6YHK3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC29.82■■■□□ 2.36
CD109Q6YHK3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
CD109Q6YHK3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CD109Q6YHK3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC29.81■■■□□ 2.36
CD109Q6YHK3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CD109Q6YHK3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CD109Q6YHK3 AC092597.1-201ENST00000487352 616 ntBASIC29.81■■■□□ 2.36
CD109Q6YHK3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC29.81■■■□□ 2.36
CD109Q6YHK3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CD109Q6YHK3 AL732292.2-201ENST00000609649 430 ntBASIC29.81■■■□□ 2.36
CD109Q6YHK3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CD109Q6YHK3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CD109Q6YHK3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC29.81■■■□□ 2.36
CD109Q6YHK3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
CD109Q6YHK3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CD109Q6YHK3 KRT18P1-202ENST00000452408 1331 ntBASIC29.81■■■□□ 2.36
CD109Q6YHK3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CD109Q6YHK3 Z98882.1-201ENST00000622160 2253 ntBASIC29.81■■■□□ 2.36
CD109Q6YHK3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
CD109Q6YHK3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC29.8■■■□□ 2.36
CD109Q6YHK3 BX276092.5-203ENST00000456199 560 ntBASIC29.8■■■□□ 2.36
CD109Q6YHK3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
CD109Q6YHK3 AL160237.2-201ENST00000556165 472 ntBASIC29.8■■■□□ 2.36
CD109Q6YHK3 AC011498.5-201ENST00000592027 486 ntBASIC29.8■■■□□ 2.36
CD109Q6YHK3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
CD109Q6YHK3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC29.8■■■□□ 2.36
CD109Q6YHK3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
CD109Q6YHK3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC29.8■■■□□ 2.36
CD109Q6YHK3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
CD109Q6YHK3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CD109Q6YHK3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CD109Q6YHK3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms