Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
C11orf88Q6PI97 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 AC073111.5-205ENST00000641717 521 ntBASIC16.98■□□□□ 0.31
C11orf88Q6PI97 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 AC007613.1-201ENST00000572811 2597 ntBASIC16.98■□□□□ 0.31
C11orf88Q6PI97 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
C11orf88Q6PI97 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
C11orf88Q6PI97 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.97■□□□□ 0.31
C11orf88Q6PI97 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.97■□□□□ 0.31
C11orf88Q6PI97 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
C11orf88Q6PI97 AC093484.2-201ENST00000580996 2166 ntBASIC16.97■□□□□ 0.31
C11orf88Q6PI97 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
C11orf88Q6PI97 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
C11orf88Q6PI97 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
C11orf88Q6PI97 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
C11orf88Q6PI97 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.97■□□□□ 0.31
C11orf88Q6PI97 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.97■□□□□ 0.31
C11orf88Q6PI97 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
C11orf88Q6PI97 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
C11orf88Q6PI97 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.97■□□□□ 0.31
C11orf88Q6PI97 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
C11orf88Q6PI97 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.97■□□□□ 0.31
C11orf88Q6PI97 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.97■□□□□ 0.31
C11orf88Q6PI97 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
C11orf88Q6PI97 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C11orf88Q6PI97 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
C11orf88Q6PI97 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C11orf88Q6PI97 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C11orf88Q6PI97 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.96■□□□□ 0.31
C11orf88Q6PI97 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
C11orf88Q6PI97 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.96■□□□□ 0.31
C11orf88Q6PI97 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
C11orf88Q6PI97 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
C11orf88Q6PI97 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.96■□□□□ 0.31
C11orf88Q6PI97 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
C11orf88Q6PI97 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
C11orf88Q6PI97 KRT18P61-201ENST00000585825 1298 ntBASIC16.96■□□□□ 0.31
C11orf88Q6PI97 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
C11orf88Q6PI97 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
C11orf88Q6PI97 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
C11orf88Q6PI97 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
C11orf88Q6PI97 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
C11orf88Q6PI97 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.96■□□□□ 0.31
C11orf88Q6PI97 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
C11orf88Q6PI97 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
C11orf88Q6PI97 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C11orf88Q6PI97 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
C11orf88Q6PI97 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
C11orf88Q6PI97 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.96■□□□□ 0.3
C11orf88Q6PI97 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.96■□□□□ 0.3
C11orf88Q6PI97 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
C11orf88Q6PI97 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.96■□□□□ 0.3
C11orf88Q6PI97 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
C11orf88Q6PI97 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C11orf88Q6PI97 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
C11orf88Q6PI97 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms