Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
KRT40Q6A162 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
KRT40Q6A162 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC22.65■■□□□ 1.22
KRT40Q6A162 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
KRT40Q6A162 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
KRT40Q6A162 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC22.65■■□□□ 1.22
KRT40Q6A162 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
KRT40Q6A162 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
KRT40Q6A162 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
KRT40Q6A162 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.22
KRT40Q6A162 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC22.64■■□□□ 1.21
KRT40Q6A162 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
KRT40Q6A162 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
KRT40Q6A162 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC22.64■■□□□ 1.21
KRT40Q6A162 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.64■■□□□ 1.21
KRT40Q6A162 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
KRT40Q6A162 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
KRT40Q6A162 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC22.64■■□□□ 1.21
KRT40Q6A162 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC22.64■■□□□ 1.21
KRT40Q6A162 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC22.64■■□□□ 1.21
KRT40Q6A162 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
KRT40Q6A162 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC22.64■■□□□ 1.21
KRT40Q6A162 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
KRT40Q6A162 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
KRT40Q6A162 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
KRT40Q6A162 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
KRT40Q6A162 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
KRT40Q6A162 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC22.63■■□□□ 1.21
KRT40Q6A162 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
KRT40Q6A162 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KRT40Q6A162 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
KRT40Q6A162 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KRT40Q6A162 TP73-202ENST00000354437 2140 ntTSL 5 BASIC22.63■■□□□ 1.21
KRT40Q6A162 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KRT40Q6A162 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
KRT40Q6A162 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
KRT40Q6A162 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KRT40Q6A162 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KRT40Q6A162 KRT18P21-201ENST00000515767 1272 ntBASIC22.63■■□□□ 1.21
KRT40Q6A162 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC22.63■■□□□ 1.21
KRT40Q6A162 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
KRT40Q6A162 Z99916.2-201ENST00000604037 246 ntBASIC22.63■■□□□ 1.21
KRT40Q6A162 REXO1L12P-201ENST00000622156 912 ntBASIC22.63■■□□□ 1.21
KRT40Q6A162 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC22.63■■□□□ 1.21
KRT40Q6A162 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC22.63■■□□□ 1.21
KRT40Q6A162 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KRT40Q6A162 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC22.63■■□□□ 1.21
KRT40Q6A162 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC22.63■■□□□ 1.21
KRT40Q6A162 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC22.63■■□□□ 1.21
KRT40Q6A162 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
KRT40Q6A162 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KRT40Q6A162 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
KRT40Q6A162 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC22.62■■□□□ 1.21
KRT40Q6A162 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
KRT40Q6A162 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
KRT40Q6A162 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC22.62■■□□□ 1.21
KRT40Q6A162 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC22.62■■□□□ 1.21
KRT40Q6A162 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC22.62■■□□□ 1.21
KRT40Q6A162 SNORA78-201ENST00000459373 127 ntBASIC22.62■■□□□ 1.21
KRT40Q6A162 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC22.62■■□□□ 1.21
KRT40Q6A162 AL121906.2-201ENST00000621597 723 ntBASIC22.62■■□□□ 1.21
KRT40Q6A162 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC22.62■■□□□ 1.21
KRT40Q6A162 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
KRT40Q6A162 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC22.62■■□□□ 1.21
KRT40Q6A162 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
KRT40Q6A162 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
KRT40Q6A162 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
KRT40Q6A162 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
KRT40Q6A162 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
KRT40Q6A162 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
KRT40Q6A162 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
KRT40Q6A162 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
KRT40Q6A162 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
KRT40Q6A162 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
KRT40Q6A162 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
KRT40Q6A162 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
KRT40Q6A162 PNN-205ENST00000556530 601 ntTSL 2 BASIC22.61■■□□□ 1.21
KRT40Q6A162 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
KRT40Q6A162 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
KRT40Q6A162 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
KRT40Q6A162 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC22.61■■□□□ 1.21
KRT40Q6A162 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
KRT40Q6A162 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
KRT40Q6A162 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC22.61■■□□□ 1.21
KRT40Q6A162 AC005332.7-201ENST00000614046 2005 ntBASIC22.6■■□□□ 1.21
KRT40Q6A162 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC22.6■■□□□ 1.21
KRT40Q6A162 Z82202.1-201ENST00000623446 1880 ntBASIC22.6■■□□□ 1.21
KRT40Q6A162 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC22.6■■□□□ 1.21
KRT40Q6A162 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
KRT40Q6A162 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC22.6■■□□□ 1.21
KRT40Q6A162 MIR718-201ENST00000390190 70 ntBASIC22.6■■□□□ 1.21
KRT40Q6A162 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
KRT40Q6A162 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.6■■□□□ 1.21
KRT40Q6A162 RPPH1-201ENST00000516869 333 ntBASIC22.6■■□□□ 1.21
KRT40Q6A162 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.6■■□□□ 1.21
KRT40Q6A162 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC22.6■■□□□ 1.21
KRT40Q6A162 FAM197Y4-202ENST00000622692 608 ntBASIC22.6■■□□□ 1.21
KRT40Q6A162 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
KRT40Q6A162 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
KRT40Q6A162 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms