Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
RNF213Q63HN8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RNF213Q63HN8 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RNF213Q63HN8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC10.49□□□□□ -0.73
RNF213Q63HN8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
RNF213Q63HN8 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
RNF213Q63HN8 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
RNF213Q63HN8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC10.49□□□□□ -0.73
RNF213Q63HN8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
RNF213Q63HN8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
RNF213Q63HN8 IMP4-203ENST00000409935 958 ntTSL 5 BASIC10.49□□□□□ -0.73
RNF213Q63HN8 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC10.49□□□□□ -0.73
RNF213Q63HN8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC10.49□□□□□ -0.73
RNF213Q63HN8 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RNF213Q63HN8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RNF213Q63HN8 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RNF213Q63HN8 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RNF213Q63HN8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC10.49□□□□□ -0.73
RNF213Q63HN8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RNF213Q63HN8 KLK8-202ENST00000320838 456 ntTSL 5 BASIC10.49□□□□□ -0.73
RNF213Q63HN8 DDT-203ENST00000403754 569 ntTSL 3 BASIC10.49□□□□□ -0.73
RNF213Q63HN8 Z85996.1-201ENST00000494644 937 ntBASIC10.49□□□□□ -0.73
RNF213Q63HN8 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC10.49□□□□□ -0.73
RNF213Q63HN8 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC10.49□□□□□ -0.73
RNF213Q63HN8 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RNF213Q63HN8 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RNF213Q63HN8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
RNF213Q63HN8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
RNF213Q63HN8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RNF213Q63HN8 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
RNF213Q63HN8 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC10.49□□□□□ -0.73
RNF213Q63HN8 AP006288.1-201ENST00000446065 395 ntBASIC10.49□□□□□ -0.73
RNF213Q63HN8 MIR7706-201ENST00000613747 67 ntBASIC10.49□□□□□ -0.73
RNF213Q63HN8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RNF213Q63HN8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC10.49□□□□□ -0.73
RNF213Q63HN8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC10.49□□□□□ -0.73
RNF213Q63HN8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RNF213Q63HN8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC10.48□□□□□ -0.73
RNF213Q63HN8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
RNF213Q63HN8 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC10.48□□□□□ -0.73
RNF213Q63HN8 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
RNF213Q63HN8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC10.48□□□□□ -0.73
RNF213Q63HN8 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RNF213Q63HN8 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
RNF213Q63HN8 AC022494.1-201ENST00000466044 728 ntBASIC10.48□□□□□ -0.73
RNF213Q63HN8 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC10.48□□□□□ -0.73
RNF213Q63HN8 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
RNF213Q63HN8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC10.48□□□□□ -0.73
RNF213Q63HN8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
RNF213Q63HN8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
RNF213Q63HN8 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RNF213Q63HN8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC10.48□□□□□ -0.73
RNF213Q63HN8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
RNF213Q63HN8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RNF213Q63HN8 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC10.48□□□□□ -0.73
RNF213Q63HN8 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
RNF213Q63HN8 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC10.48□□□□□ -0.73
RNF213Q63HN8 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC10.48□□□□□ -0.73
RNF213Q63HN8 CA15P1-201ENST00000481698 905 ntBASIC10.48□□□□□ -0.73
RNF213Q63HN8 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC10.48□□□□□ -0.73
RNF213Q63HN8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC10.48□□□□□ -0.73
RNF213Q63HN8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
RNF213Q63HN8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
RNF213Q63HN8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC10.48□□□□□ -0.73
RNF213Q63HN8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
RNF213Q63HN8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
RNF213Q63HN8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RNF213Q63HN8 MED22-202ENST00000371999 987 ntTSL 3 BASIC10.48□□□□□ -0.73
RNF213Q63HN8 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
RNF213Q63HN8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
RNF213Q63HN8 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC10.48□□□□□ -0.73
RNF213Q63HN8 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC10.48□□□□□ -0.73
RNF213Q63HN8 AL121672.3-201ENST00000608644 468 ntBASIC10.48□□□□□ -0.73
RNF213Q63HN8 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC10.48□□□□□ -0.73
RNF213Q63HN8 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC10.48□□□□□ -0.73
RNF213Q63HN8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RNF213Q63HN8 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
RNF213Q63HN8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RNF213Q63HN8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC10.48□□□□□ -0.73
RNF213Q63HN8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
RNF213Q63HN8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RNF213Q63HN8 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC10.48□□□□□ -0.73
RNF213Q63HN8 AL049840.3-201ENST00000602669 611 ntBASIC10.48□□□□□ -0.73
RNF213Q63HN8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
RNF213Q63HN8 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
RNF213Q63HN8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
RNF213Q63HN8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
RNF213Q63HN8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC10.47□□□□□ -0.73
RNF213Q63HN8 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC10.47□□□□□ -0.73
RNF213Q63HN8 AC009065.1-201ENST00000564055 1225 ntBASIC10.47□□□□□ -0.73
RNF213Q63HN8 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC10.47□□□□□ -0.73
RNF213Q63HN8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC10.47□□□□□ -0.73
RNF213Q63HN8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
RNF213Q63HN8 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RNF213Q63HN8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
RNF213Q63HN8 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RNF213Q63HN8 AC027601.4-201ENST00000611259 610 ntBASIC10.47□□□□□ -0.73
RNF213Q63HN8 AC106028.4-201ENST00000614509 607 ntBASIC10.47□□□□□ -0.73
RNF213Q63HN8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC10.47□□□□□ -0.73
RNF213Q63HN8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms