Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AL160286.2-201ENST00000567150 934 ntBASIC19.24■□□□□ 0.67
LYSMD4Q5XG99 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.24■□□□□ 0.67
LYSMD4Q5XG99 AL023973.1-201ENST00000624619 620 ntBASIC19.24■□□□□ 0.67
LYSMD4Q5XG99 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
LYSMD4Q5XG99 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LYSMD4Q5XG99 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LYSMD4Q5XG99 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LYSMD4Q5XG99 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
LYSMD4Q5XG99 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.23■□□□□ 0.67
LYSMD4Q5XG99 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
LYSMD4Q5XG99 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LYSMD4Q5XG99 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
LYSMD4Q5XG99 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LYSMD4Q5XG99 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LYSMD4Q5XG99 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LYSMD4Q5XG99 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LYSMD4Q5XG99 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.23■□□□□ 0.67
LYSMD4Q5XG99 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LYSMD4Q5XG99 TPM4P1-201ENST00000436100 807 ntBASIC19.23■□□□□ 0.67
LYSMD4Q5XG99 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LYSMD4Q5XG99 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.23■□□□□ 0.67
LYSMD4Q5XG99 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
LYSMD4Q5XG99 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.23■□□□□ 0.67
LYSMD4Q5XG99 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LYSMD4Q5XG99 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
LYSMD4Q5XG99 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LYSMD4Q5XG99 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LYSMD4Q5XG99 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
LYSMD4Q5XG99 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
LYSMD4Q5XG99 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.22■□□□□ 0.67
LYSMD4Q5XG99 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
LYSMD4Q5XG99 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LYSMD4Q5XG99 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LYSMD4Q5XG99 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LYSMD4Q5XG99 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LYSMD4Q5XG99 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LYSMD4Q5XG99 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LYSMD4Q5XG99 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LYSMD4Q5XG99 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.22■□□□□ 0.67
LYSMD4Q5XG99 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.22■□□□□ 0.67
LYSMD4Q5XG99 AL441883.1-201ENST00000566170 1045 ntBASIC19.22■□□□□ 0.67
LYSMD4Q5XG99 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LYSMD4Q5XG99 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LYSMD4Q5XG99 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
LYSMD4Q5XG99 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
LYSMD4Q5XG99 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LYSMD4Q5XG99 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LYSMD4Q5XG99 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LYSMD4Q5XG99 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
LYSMD4Q5XG99 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
LYSMD4Q5XG99 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LYSMD4Q5XG99 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.21■□□□□ 0.67
LYSMD4Q5XG99 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.21■□□□□ 0.67
LYSMD4Q5XG99 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.21■□□□□ 0.67
LYSMD4Q5XG99 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LYSMD4Q5XG99 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
LYSMD4Q5XG99 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LYSMD4Q5XG99 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
LYSMD4Q5XG99 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LYSMD4Q5XG99 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD4Q5XG99 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD4Q5XG99 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.2■□□□□ 0.66
LYSMD4Q5XG99 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD4Q5XG99 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD4Q5XG99 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.2■□□□□ 0.66
LYSMD4Q5XG99 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD4Q5XG99 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.2■□□□□ 0.66
LYSMD4Q5XG99 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.2■□□□□ 0.66
LYSMD4Q5XG99 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.2■□□□□ 0.66
LYSMD4Q5XG99 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD4Q5XG99 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.2■□□□□ 0.66
LYSMD4Q5XG99 AC008622.2-201ENST00000617006 1229 ntBASIC19.2■□□□□ 0.66
LYSMD4Q5XG99 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD4Q5XG99 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD4Q5XG99 SMG8-203ENST00000578922 2178 ntBASIC19.2■□□□□ 0.66
LYSMD4Q5XG99 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LYSMD4Q5XG99 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD4Q5XG99 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.2■□□□□ 0.66
LYSMD4Q5XG99 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD4Q5XG99 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LYSMD4Q5XG99 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LYSMD4Q5XG99 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.19■□□□□ 0.66
LYSMD4Q5XG99 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.19■□□□□ 0.66
LYSMD4Q5XG99 HCG4P8-203ENST00000443049 980 ntBASIC19.19■□□□□ 0.66
LYSMD4Q5XG99 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.19■□□□□ 0.66
LYSMD4Q5XG99 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.19■□□□□ 0.66
LYSMD4Q5XG99 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LYSMD4Q5XG99 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LYSMD4Q5XG99 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LYSMD4Q5XG99 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.19■□□□□ 0.66
LYSMD4Q5XG99 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LYSMD4Q5XG99 AC005332.1-201ENST00000577698 1310 ntBASIC19.19■□□□□ 0.66
LYSMD4Q5XG99 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.19■□□□□ 0.66
LYSMD4Q5XG99 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LYSMD4Q5XG99 PKD1P6-201ENST00000343738 4769 ntBASIC19.19■□□□□ 0.66
LYSMD4Q5XG99 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD4Q5XG99 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.18■□□□□ 0.66
LYSMD4Q5XG99 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD4Q5XG99 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.18■□□□□ 0.66
LYSMD4Q5XG99 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms