Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
UBR4Q5T4S7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
UBR4Q5T4S7 AP003733.4-201ENST00000623785 1697 ntBASIC10.77□□□□□ -0.68
UBR4Q5T4S7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
UBR4Q5T4S7 ZNF259P1-201ENST00000407656 1365 ntBASIC10.77□□□□□ -0.69
UBR4Q5T4S7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
UBR4Q5T4S7 YBX2P1-201ENST00000394192 760 ntBASIC10.77□□□□□ -0.69
UBR4Q5T4S7 BAD-202ENST00000394531 631 ntTSL 3 BASIC10.77□□□□□ -0.69
UBR4Q5T4S7 AL645939.2-201ENST00000427340 991 ntBASIC10.77□□□□□ -0.69
UBR4Q5T4S7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC10.77□□□□□ -0.69
UBR4Q5T4S7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC10.77□□□□□ -0.69
UBR4Q5T4S7 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
UBR4Q5T4S7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBR4Q5T4S7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
UBR4Q5T4S7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBR4Q5T4S7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC10.77□□□□□ -0.69
UBR4Q5T4S7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
UBR4Q5T4S7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC10.77□□□□□ -0.69
UBR4Q5T4S7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
UBR4Q5T4S7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC10.77□□□□□ -0.69
UBR4Q5T4S7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC10.77□□□□□ -0.69
UBR4Q5T4S7 AC026471.6-201ENST00000622954 1905 ntBASIC10.77□□□□□ -0.69
UBR4Q5T4S7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC10.77□□□□□ -0.69
UBR4Q5T4S7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBR4Q5T4S7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC10.77□□□□□ -0.69
UBR4Q5T4S7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC10.77□□□□□ -0.69
UBR4Q5T4S7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBR4Q5T4S7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC10.77□□□□□ -0.69
UBR4Q5T4S7 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC10.77□□□□□ -0.69
UBR4Q5T4S7 AC005225.4-201ENST00000557330 545 ntBASIC10.77□□□□□ -0.69
UBR4Q5T4S7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBR4Q5T4S7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBR4Q5T4S7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
UBR4Q5T4S7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBR4Q5T4S7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC10.76□□□□□ -0.69
UBR4Q5T4S7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
UBR4Q5T4S7 AP005901.3-202ENST00000581653 237 ntBASIC10.76□□□□□ -0.69
UBR4Q5T4S7 AC008687.5-201ENST00000593746 558 ntBASIC10.76□□□□□ -0.69
UBR4Q5T4S7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBR4Q5T4S7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBR4Q5T4S7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
UBR4Q5T4S7 KRT8P36-201ENST00000489121 1440 ntBASIC10.76□□□□□ -0.69
UBR4Q5T4S7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBR4Q5T4S7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC10.76□□□□□ -0.69
UBR4Q5T4S7 CHCHD2P8-201ENST00000429873 447 ntBASIC10.76□□□□□ -0.69
UBR4Q5T4S7 DNAJB3-201ENST00000446806 729 ntBASIC10.76□□□□□ -0.69
UBR4Q5T4S7 AP003041.3-201ENST00000527151 707 ntBASIC10.76□□□□□ -0.69
UBR4Q5T4S7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC10.76□□□□□ -0.69
UBR4Q5T4S7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBR4Q5T4S7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBR4Q5T4S7 FAM197Y8-203ENST00000450145 560 ntBASIC10.76□□□□□ -0.69
UBR4Q5T4S7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC10.76□□□□□ -0.69
UBR4Q5T4S7 AC034232.1-201ENST00000506026 1064 ntBASIC10.76□□□□□ -0.69
UBR4Q5T4S7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
UBR4Q5T4S7 CD63-204ENST00000546939 779 ntTSL 3 BASIC10.76□□□□□ -0.69
UBR4Q5T4S7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC10.76□□□□□ -0.69
UBR4Q5T4S7 TP73-AS1-207ENST00000624167 988 ntBASIC10.76□□□□□ -0.69
UBR4Q5T4S7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
UBR4Q5T4S7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC10.76□□□□□ -0.69
UBR4Q5T4S7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBR4Q5T4S7 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC10.76□□□□□ -0.69
UBR4Q5T4S7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBR4Q5T4S7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
UBR4Q5T4S7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
UBR4Q5T4S7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC10.76□□□□□ -0.69
UBR4Q5T4S7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBR4Q5T4S7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
UBR4Q5T4S7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBR4Q5T4S7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBR4Q5T4S7 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
UBR4Q5T4S7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC10.76□□□□□ -0.69
UBR4Q5T4S7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBR4Q5T4S7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC10.75□□□□□ -0.69
UBR4Q5T4S7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC10.75□□□□□ -0.69
UBR4Q5T4S7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC10.75□□□□□ -0.69
UBR4Q5T4S7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC10.75□□□□□ -0.69
UBR4Q5T4S7 AC010542.4-201ENST00000563151 1910 ntBASIC10.75□□□□□ -0.69
UBR4Q5T4S7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC10.75□□□□□ -0.69
UBR4Q5T4S7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBR4Q5T4S7 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
UBR4Q5T4S7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC10.75□□□□□ -0.69
UBR4Q5T4S7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC10.75□□□□□ -0.69
UBR4Q5T4S7 AL096865.1-201ENST00000606796 927 ntBASIC10.75□□□□□ -0.69
UBR4Q5T4S7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
UBR4Q5T4S7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBR4Q5T4S7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
UBR4Q5T4S7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC10.75□□□□□ -0.69
UBR4Q5T4S7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC10.75□□□□□ -0.69
UBR4Q5T4S7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC10.75□□□□□ -0.69
UBR4Q5T4S7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC10.75□□□□□ -0.69
UBR4Q5T4S7 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC10.75□□□□□ -0.69
UBR4Q5T4S7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBR4Q5T4S7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
UBR4Q5T4S7 MIR4745-201ENST00000577608 62 ntBASIC10.75□□□□□ -0.69
UBR4Q5T4S7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC10.75□□□□□ -0.69
UBR4Q5T4S7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBR4Q5T4S7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
UBR4Q5T4S7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBR4Q5T4S7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms