Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VARS2Q5ST30 CRYGFP-201ENST00000418459 633 ntBASIC20.72■□□□□ 0.91
VARS2Q5ST30 AC004951.3-201ENST00000418645 1148 ntBASIC20.72■□□□□ 0.91
VARS2Q5ST30 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.72■□□□□ 0.91
VARS2Q5ST30 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.72■□□□□ 0.91
VARS2Q5ST30 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.72■□□□□ 0.91
VARS2Q5ST30 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
VARS2Q5ST30 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
VARS2Q5ST30 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.72■□□□□ 0.91
VARS2Q5ST30 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.72■□□□□ 0.91
VARS2Q5ST30 AP000692.2-201ENST00000608391 879 ntBASIC20.72■□□□□ 0.91
VARS2Q5ST30 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.72■□□□□ 0.91
VARS2Q5ST30 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VARS2Q5ST30 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.72■□□□□ 0.91
VARS2Q5ST30 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VARS2Q5ST30 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VARS2Q5ST30 AC009237.14-201ENST00000609975 1594 ntBASIC20.72■□□□□ 0.91
VARS2Q5ST30 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VARS2Q5ST30 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VARS2Q5ST30 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
VARS2Q5ST30 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VARS2Q5ST30 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
VARS2Q5ST30 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
VARS2Q5ST30 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VARS2Q5ST30 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VARS2Q5ST30 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
VARS2Q5ST30 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.71■□□□□ 0.91
VARS2Q5ST30 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.71■□□□□ 0.91
VARS2Q5ST30 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.71■□□□□ 0.91
VARS2Q5ST30 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.71■□□□□ 0.91
VARS2Q5ST30 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.71■□□□□ 0.91
VARS2Q5ST30 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
VARS2Q5ST30 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.71■□□□□ 0.91
VARS2Q5ST30 AL590326.2-201ENST00000625139 305 ntBASIC20.71■□□□□ 0.91
VARS2Q5ST30 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VARS2Q5ST30 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VARS2Q5ST30 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VARS2Q5ST30 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VARS2Q5ST30 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
VARS2Q5ST30 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
VARS2Q5ST30 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.7■□□□□ 0.9
VARS2Q5ST30 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
VARS2Q5ST30 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VARS2Q5ST30 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VARS2Q5ST30 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
VARS2Q5ST30 AC005521.1-201ENST00000393351 872 ntBASIC20.7■□□□□ 0.9
VARS2Q5ST30 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.7■□□□□ 0.9
VARS2Q5ST30 AC113347.1-201ENST00000413321 391 ntBASIC20.7■□□□□ 0.9
VARS2Q5ST30 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VARS2Q5ST30 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VARS2Q5ST30 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.7■□□□□ 0.9
VARS2Q5ST30 Z85996.1-201ENST00000494644 937 ntBASIC20.7■□□□□ 0.9
VARS2Q5ST30 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.7■□□□□ 0.9
VARS2Q5ST30 C2orf69P3-201ENST00000565542 1120 ntBASIC20.7■□□□□ 0.9
VARS2Q5ST30 SLC25A1P4-201ENST00000567977 778 ntBASIC20.7■□□□□ 0.9
VARS2Q5ST30 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.7■□□□□ 0.9
VARS2Q5ST30 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VARS2Q5ST30 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VARS2Q5ST30 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
VARS2Q5ST30 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VARS2Q5ST30 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
VARS2Q5ST30 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.69■□□□□ 0.9
VARS2Q5ST30 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.69■□□□□ 0.9
VARS2Q5ST30 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
VARS2Q5ST30 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.69■□□□□ 0.9
VARS2Q5ST30 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
VARS2Q5ST30 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VARS2Q5ST30 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
VARS2Q5ST30 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VARS2Q5ST30 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.69■□□□□ 0.9
VARS2Q5ST30 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.69■□□□□ 0.9
VARS2Q5ST30 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VARS2Q5ST30 AL049597.2-201ENST00000565575 961 ntBASIC20.69■□□□□ 0.9
VARS2Q5ST30 AC092865.7-201ENST00000641832 219 ntBASIC20.69■□□□□ 0.9
VARS2Q5ST30 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VARS2Q5ST30 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VARS2Q5ST30 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.69■□□□□ 0.9
VARS2Q5ST30 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
VARS2Q5ST30 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.69■□□□□ 0.9
VARS2Q5ST30 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.69■□□□□ 0.9
VARS2Q5ST30 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VARS2Q5ST30 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
VARS2Q5ST30 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VARS2Q5ST30 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VARS2Q5ST30 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VARS2Q5ST30 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VARS2Q5ST30 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VARS2Q5ST30 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.68■□□□□ 0.9
VARS2Q5ST30 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VARS2Q5ST30 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VARS2Q5ST30 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VARS2Q5ST30 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VARS2Q5ST30 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.68■□□□□ 0.9
VARS2Q5ST30 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.68■□□□□ 0.9
VARS2Q5ST30 FAM207BP-201ENST00000447172 505 ntBASIC20.68■□□□□ 0.9
VARS2Q5ST30 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.68■□□□□ 0.9
VARS2Q5ST30 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
VARS2Q5ST30 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VARS2Q5ST30 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VARS2Q5ST30 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms