Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KHDC1Q4VXA5 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KHDC1Q4VXA5 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KHDC1Q4VXA5 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KHDC1Q4VXA5 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.76■□□□□ 0.75
KHDC1Q4VXA5 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
KHDC1Q4VXA5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.76■□□□□ 0.75
KHDC1Q4VXA5 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
KHDC1Q4VXA5 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KHDC1Q4VXA5 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.76■□□□□ 0.75
KHDC1Q4VXA5 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
KHDC1Q4VXA5 AL390719.1-204ENST00000412397 1219 ntBASIC19.76■□□□□ 0.75
KHDC1Q4VXA5 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KHDC1Q4VXA5 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.76■□□□□ 0.75
KHDC1Q4VXA5 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.76■□□□□ 0.75
KHDC1Q4VXA5 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.76■□□□□ 0.75
KHDC1Q4VXA5 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KHDC1Q4VXA5 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.76■□□□□ 0.75
KHDC1Q4VXA5 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.76■□□□□ 0.75
KHDC1Q4VXA5 AC008687.6-201ENST00000596318 630 ntBASIC19.76■□□□□ 0.75
KHDC1Q4VXA5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KHDC1Q4VXA5 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
KHDC1Q4VXA5 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
KHDC1Q4VXA5 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KHDC1Q4VXA5 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
KHDC1Q4VXA5 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KHDC1Q4VXA5 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KHDC1Q4VXA5 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
KHDC1Q4VXA5 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
KHDC1Q4VXA5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KHDC1Q4VXA5 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.75■□□□□ 0.75
KHDC1Q4VXA5 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KHDC1Q4VXA5 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.75■□□□□ 0.75
KHDC1Q4VXA5 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.75■□□□□ 0.75
KHDC1Q4VXA5 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KHDC1Q4VXA5 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.75■□□□□ 0.75
KHDC1Q4VXA5 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KHDC1Q4VXA5 AC006058.3-201ENST00000606217 1069 ntBASIC19.75■□□□□ 0.75
KHDC1Q4VXA5 AC120498.8-201ENST00000614275 531 ntBASIC19.75■□□□□ 0.75
KHDC1Q4VXA5 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KHDC1Q4VXA5 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KHDC1Q4VXA5 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KHDC1Q4VXA5 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
KHDC1Q4VXA5 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KHDC1Q4VXA5 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
KHDC1Q4VXA5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KHDC1Q4VXA5 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KHDC1Q4VXA5 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KHDC1Q4VXA5 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KHDC1Q4VXA5 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KHDC1Q4VXA5 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KHDC1Q4VXA5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.74■□□□□ 0.75
KHDC1Q4VXA5 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KHDC1Q4VXA5 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.74■□□□□ 0.75
KHDC1Q4VXA5 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
KHDC1Q4VXA5 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KHDC1Q4VXA5 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KHDC1Q4VXA5 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
KHDC1Q4VXA5 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KHDC1Q4VXA5 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KHDC1Q4VXA5 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
KHDC1Q4VXA5 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KHDC1Q4VXA5 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KHDC1Q4VXA5 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
KHDC1Q4VXA5 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KHDC1Q4VXA5 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KHDC1Q4VXA5 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KHDC1Q4VXA5 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KHDC1Q4VXA5 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KHDC1Q4VXA5 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KHDC1Q4VXA5 FAM201B-201ENST00000458407 597 ntBASIC19.74■□□□□ 0.75
KHDC1Q4VXA5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.74■□□□□ 0.75
KHDC1Q4VXA5 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.74■□□□□ 0.75
KHDC1Q4VXA5 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KHDC1Q4VXA5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KHDC1Q4VXA5 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
KHDC1Q4VXA5 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KHDC1Q4VXA5 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
KHDC1Q4VXA5 BX119927.1-201ENST00000636596 1552 ntBASIC19.74■□□□□ 0.75
KHDC1Q4VXA5 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KHDC1Q4VXA5 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
KHDC1Q4VXA5 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
KHDC1Q4VXA5 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KHDC1Q4VXA5 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
KHDC1Q4VXA5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.73■□□□□ 0.75
KHDC1Q4VXA5 AC005332.7-201ENST00000614046 2005 ntBASIC19.73■□□□□ 0.75
KHDC1Q4VXA5 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
KHDC1Q4VXA5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KHDC1Q4VXA5 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
KHDC1Q4VXA5 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KHDC1Q4VXA5 HLA-G-202ENST00000376815 851 ntBASIC19.73■□□□□ 0.75
KHDC1Q4VXA5 HLA-G-203ENST00000376818 1127 ntBASIC19.73■□□□□ 0.75
KHDC1Q4VXA5 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
KHDC1Q4VXA5 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.73■□□□□ 0.75
KHDC1Q4VXA5 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.73■□□□□ 0.75
KHDC1Q4VXA5 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.73■□□□□ 0.75
KHDC1Q4VXA5 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.73■□□□□ 0.75
KHDC1Q4VXA5 AC073648.6-201ENST00000641589 218 ntBASIC19.73■□□□□ 0.75
KHDC1Q4VXA5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.73■□□□□ 0.75
KHDC1Q4VXA5 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms