Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PTPN20Q4JDL3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN20Q4JDL3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.6■□□□□ 0.89
PTPN20Q4JDL3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN20Q4JDL3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.59■□□□□ 0.89
PTPN20Q4JDL3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PTPN20Q4JDL3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.59■□□□□ 0.89
PTPN20Q4JDL3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN20Q4JDL3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PTPN20Q4JDL3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN20Q4JDL3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN20Q4JDL3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PTPN20Q4JDL3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN20Q4JDL3 RN7SL471P-201ENST00000580476 299 ntBASIC20.59■□□□□ 0.89
PTPN20Q4JDL3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN20Q4JDL3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PTPN20Q4JDL3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN20Q4JDL3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN20Q4JDL3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.59■□□□□ 0.89
PTPN20Q4JDL3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.59■□□□□ 0.89
PTPN20Q4JDL3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN20Q4JDL3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN20Q4JDL3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN20Q4JDL3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN20Q4JDL3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.58■□□□□ 0.89
PTPN20Q4JDL3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN20Q4JDL3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PTPN20Q4JDL3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN20Q4JDL3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN20Q4JDL3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN20Q4JDL3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.58■□□□□ 0.89
PTPN20Q4JDL3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
PTPN20Q4JDL3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.58■□□□□ 0.89
PTPN20Q4JDL3 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN20Q4JDL3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
PTPN20Q4JDL3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTPN20Q4JDL3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PTPN20Q4JDL3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.58■□□□□ 0.88
PTPN20Q4JDL3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTPN20Q4JDL3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTPN20Q4JDL3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.58■□□□□ 0.88
PTPN20Q4JDL3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
PTPN20Q4JDL3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PTPN20Q4JDL3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN20Q4JDL3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN20Q4JDL3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.57■□□□□ 0.88
PTPN20Q4JDL3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
PTPN20Q4JDL3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.57■□□□□ 0.88
PTPN20Q4JDL3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN20Q4JDL3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.57■□□□□ 0.88
PTPN20Q4JDL3 KRASP1-201ENST00000407852 552 ntBASIC20.57■□□□□ 0.88
PTPN20Q4JDL3 AC239809.2-201ENST00000415381 517 ntBASIC20.57■□□□□ 0.88
PTPN20Q4JDL3 KRT8P8-201ENST00000434750 1448 ntBASIC20.57■□□□□ 0.88
PTPN20Q4JDL3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.57■□□□□ 0.88
PTPN20Q4JDL3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.57■□□□□ 0.88
PTPN20Q4JDL3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
PTPN20Q4JDL3 AC124016.1-201ENST00000609552 612 ntBASIC20.57■□□□□ 0.88
PTPN20Q4JDL3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PTPN20Q4JDL3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.57■□□□□ 0.88
PTPN20Q4JDL3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN20Q4JDL3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
PTPN20Q4JDL3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN20Q4JDL3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PTPN20Q4JDL3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.57■□□□□ 0.88
PTPN20Q4JDL3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PTPN20Q4JDL3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN20Q4JDL3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN20Q4JDL3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN20Q4JDL3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN20Q4JDL3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN20Q4JDL3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN20Q4JDL3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.56■□□□□ 0.88
PTPN20Q4JDL3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.56■□□□□ 0.88
PTPN20Q4JDL3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN20Q4JDL3 TUBB8P6-201ENST00000436895 1288 ntBASIC20.56■□□□□ 0.88
PTPN20Q4JDL3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.56■□□□□ 0.88
PTPN20Q4JDL3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN20Q4JDL3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.56■□□□□ 0.88
PTPN20Q4JDL3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.56■□□□□ 0.88
PTPN20Q4JDL3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.56■□□□□ 0.88
PTPN20Q4JDL3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN20Q4JDL3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN20Q4JDL3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN20Q4JDL3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN20Q4JDL3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN20Q4JDL3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN20Q4JDL3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PTPN20Q4JDL3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN20Q4JDL3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN20Q4JDL3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN20Q4JDL3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PTPN20Q4JDL3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PTPN20Q4JDL3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PTPN20Q4JDL3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN20Q4JDL3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PTPN20Q4JDL3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.55■□□□□ 0.88
PTPN20Q4JDL3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN20Q4JDL3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.55■□□□□ 0.88
PTPN20Q4JDL3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN20Q4JDL3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms