Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
DCAF4L1Q3SXM0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
DCAF4L1Q3SXM0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DCAF4L1Q3SXM0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DCAF4L1Q3SXM0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DCAF4L1Q3SXM0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
DCAF4L1Q3SXM0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DCAF4L1Q3SXM0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DCAF4L1Q3SXM0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DCAF4L1Q3SXM0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
DCAF4L1Q3SXM0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
DCAF4L1Q3SXM0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.18■□□□□ 0.98
DCAF4L1Q3SXM0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.18■□□□□ 0.98
DCAF4L1Q3SXM0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DCAF4L1Q3SXM0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.18■□□□□ 0.98
DCAF4L1Q3SXM0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DCAF4L1Q3SXM0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.18■□□□□ 0.98
DCAF4L1Q3SXM0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DCAF4L1Q3SXM0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DCAF4L1Q3SXM0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DCAF4L1Q3SXM0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.18■□□□□ 0.98
DCAF4L1Q3SXM0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DCAF4L1Q3SXM0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
DCAF4L1Q3SXM0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.17■□□□□ 0.98
DCAF4L1Q3SXM0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
DCAF4L1Q3SXM0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.17■□□□□ 0.98
DCAF4L1Q3SXM0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.17■□□□□ 0.98
DCAF4L1Q3SXM0 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.17■□□□□ 0.98
DCAF4L1Q3SXM0 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DCAF4L1Q3SXM0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.17■□□□□ 0.98
DCAF4L1Q3SXM0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DCAF4L1Q3SXM0 B3GAT3P1-201ENST00000471720 806 ntBASIC21.17■□□□□ 0.98
DCAF4L1Q3SXM0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
DCAF4L1Q3SXM0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.17■□□□□ 0.98
DCAF4L1Q3SXM0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.17■□□□□ 0.98
DCAF4L1Q3SXM0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.17■□□□□ 0.98
DCAF4L1Q3SXM0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
DCAF4L1Q3SXM0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
DCAF4L1Q3SXM0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DCAF4L1Q3SXM0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.17■□□□□ 0.98
DCAF4L1Q3SXM0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.17■□□□□ 0.98
DCAF4L1Q3SXM0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
DCAF4L1Q3SXM0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DCAF4L1Q3SXM0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
DCAF4L1Q3SXM0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.17■□□□□ 0.98
DCAF4L1Q3SXM0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
DCAF4L1Q3SXM0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
DCAF4L1Q3SXM0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DCAF4L1Q3SXM0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.16■□□□□ 0.98
DCAF4L1Q3SXM0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
DCAF4L1Q3SXM0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
DCAF4L1Q3SXM0 MESTP1-201ENST00000404287 994 ntBASIC21.16■□□□□ 0.98
DCAF4L1Q3SXM0 AC087499.1-201ENST00000418141 1075 ntBASIC21.16■□□□□ 0.98
DCAF4L1Q3SXM0 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.16■□□□□ 0.98
DCAF4L1Q3SXM0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.16■□□□□ 0.98
DCAF4L1Q3SXM0 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.16■□□□□ 0.98
DCAF4L1Q3SXM0 DGCR10-201ENST00000609839 495 ntBASIC21.16■□□□□ 0.98
DCAF4L1Q3SXM0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
DCAF4L1Q3SXM0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.16■□□□□ 0.98
DCAF4L1Q3SXM0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
DCAF4L1Q3SXM0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DCAF4L1Q3SXM0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
DCAF4L1Q3SXM0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.15■□□□□ 0.98
DCAF4L1Q3SXM0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DCAF4L1Q3SXM0 AC079598.2-202ENST00000546624 1451 ntBASIC21.15■□□□□ 0.98
DCAF4L1Q3SXM0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DCAF4L1Q3SXM0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DCAF4L1Q3SXM0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
DCAF4L1Q3SXM0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DCAF4L1Q3SXM0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DCAF4L1Q3SXM0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DCAF4L1Q3SXM0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
DCAF4L1Q3SXM0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
DCAF4L1Q3SXM0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
DCAF4L1Q3SXM0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.15■□□□□ 0.98
DCAF4L1Q3SXM0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DCAF4L1Q3SXM0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.15■□□□□ 0.98
DCAF4L1Q3SXM0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.15■□□□□ 0.98
DCAF4L1Q3SXM0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.15■□□□□ 0.98
DCAF4L1Q3SXM0 AP000525.1-201ENST00000608286 694 ntBASIC21.15■□□□□ 0.98
DCAF4L1Q3SXM0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DCAF4L1Q3SXM0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DCAF4L1Q3SXM0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
DCAF4L1Q3SXM0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
DCAF4L1Q3SXM0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
DCAF4L1Q3SXM0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DCAF4L1Q3SXM0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
DCAF4L1Q3SXM0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DCAF4L1Q3SXM0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
DCAF4L1Q3SXM0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
DCAF4L1Q3SXM0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
DCAF4L1Q3SXM0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
DCAF4L1Q3SXM0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DCAF4L1Q3SXM0 MMP23A-201ENST00000234610 1017 ntBASIC21.14■□□□□ 0.97
DCAF4L1Q3SXM0 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DCAF4L1Q3SXM0 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DCAF4L1Q3SXM0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DCAF4L1Q3SXM0 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DCAF4L1Q3SXM0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DCAF4L1Q3SXM0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms