Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RSPO4Q2I0M5 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RSPO4Q2I0M5 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RSPO4Q2I0M5 AC127496.7-201ENST00000625110 1798 ntBASIC18.98■□□□□ 0.63
RSPO4Q2I0M5 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RSPO4Q2I0M5 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RSPO4Q2I0M5 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RSPO4Q2I0M5 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RSPO4Q2I0M5 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RSPO4Q2I0M5 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RSPO4Q2I0M5 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RSPO4Q2I0M5 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RSPO4Q2I0M5 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.98■□□□□ 0.63
RSPO4Q2I0M5 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.98■□□□□ 0.63
RSPO4Q2I0M5 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.98■□□□□ 0.63
RSPO4Q2I0M5 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.98■□□□□ 0.63
RSPO4Q2I0M5 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.98■□□□□ 0.63
RSPO4Q2I0M5 AP003041.3-201ENST00000527151 707 ntBASIC18.98■□□□□ 0.63
RSPO4Q2I0M5 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.98■□□□□ 0.63
RSPO4Q2I0M5 AL662844.1-201ENST00000546340 181 ntBASIC18.98■□□□□ 0.63
RSPO4Q2I0M5 GCSHP2-201ENST00000560971 527 ntBASIC18.98■□□□□ 0.63
RSPO4Q2I0M5 SLC25A6P4-201ENST00000586535 553 ntBASIC18.98■□□□□ 0.63
RSPO4Q2I0M5 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.98■□□□□ 0.63
RSPO4Q2I0M5 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RSPO4Q2I0M5 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RSPO4Q2I0M5 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.98■□□□□ 0.63
RSPO4Q2I0M5 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.98■□□□□ 0.63
RSPO4Q2I0M5 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RSPO4Q2I0M5 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RSPO4Q2I0M5 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RSPO4Q2I0M5 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RSPO4Q2I0M5 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RSPO4Q2I0M5 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.97■□□□□ 0.63
RSPO4Q2I0M5 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RSPO4Q2I0M5 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RSPO4Q2I0M5 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.97■□□□□ 0.63
RSPO4Q2I0M5 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.97■□□□□ 0.63
RSPO4Q2I0M5 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.97■□□□□ 0.63
RSPO4Q2I0M5 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.97■□□□□ 0.63
RSPO4Q2I0M5 BX276092.5-203ENST00000456199 560 ntBASIC18.97■□□□□ 0.63
RSPO4Q2I0M5 AC106795.1-205ENST00000512851 1056 ntBASIC18.97■□□□□ 0.63
RSPO4Q2I0M5 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.97■□□□□ 0.63
RSPO4Q2I0M5 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.97■□□□□ 0.63
RSPO4Q2I0M5 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.97■□□□□ 0.63
RSPO4Q2I0M5 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RSPO4Q2I0M5 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RSPO4Q2I0M5 LINC02084-201ENST00000606069 1096 ntBASIC18.97■□□□□ 0.63
RSPO4Q2I0M5 AL121672.3-201ENST00000608644 468 ntBASIC18.97■□□□□ 0.63
RSPO4Q2I0M5 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RSPO4Q2I0M5 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RSPO4Q2I0M5 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.97■□□□□ 0.63
RSPO4Q2I0M5 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RSPO4Q2I0M5 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.97■□□□□ 0.63
RSPO4Q2I0M5 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RSPO4Q2I0M5 ECEL1P1-201ENST00000373592 1742 ntBASIC18.97■□□□□ 0.63
RSPO4Q2I0M5 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.97■□□□□ 0.63
RSPO4Q2I0M5 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RSPO4Q2I0M5 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.96■□□□□ 0.63
RSPO4Q2I0M5 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RSPO4Q2I0M5 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RSPO4Q2I0M5 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.96■□□□□ 0.63
RSPO4Q2I0M5 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RSPO4Q2I0M5 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RSPO4Q2I0M5 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RSPO4Q2I0M5 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RSPO4Q2I0M5 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RSPO4Q2I0M5 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RSPO4Q2I0M5 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RSPO4Q2I0M5 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RSPO4Q2I0M5 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.96■□□□□ 0.63
RSPO4Q2I0M5 SPDYE15P-201ENST00000424157 909 ntBASIC18.96■□□□□ 0.63
RSPO4Q2I0M5 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.96■□□□□ 0.63
RSPO4Q2I0M5 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RSPO4Q2I0M5 AP002469.2-201ENST00000531724 424 ntBASIC18.96■□□□□ 0.63
RSPO4Q2I0M5 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.96■□□□□ 0.63
RSPO4Q2I0M5 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.96■□□□□ 0.63
RSPO4Q2I0M5 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.96■□□□□ 0.63
RSPO4Q2I0M5 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RSPO4Q2I0M5 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RSPO4Q2I0M5 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RSPO4Q2I0M5 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RSPO4Q2I0M5 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RSPO4Q2I0M5 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.96■□□□□ 0.63
RSPO4Q2I0M5 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RSPO4Q2I0M5 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RSPO4Q2I0M5 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RSPO4Q2I0M5 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RSPO4Q2I0M5 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RSPO4Q2I0M5 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RSPO4Q2I0M5 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
RSPO4Q2I0M5 TSPY19P-201ENST00000418461 509 ntBASIC18.95■□□□□ 0.62
RSPO4Q2I0M5 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.95■□□□□ 0.62
RSPO4Q2I0M5 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RSPO4Q2I0M5 PMS2P1-201ENST00000431037 1228 ntBASIC18.95■□□□□ 0.62
RSPO4Q2I0M5 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RSPO4Q2I0M5 TSPY18P-201ENST00000441642 509 ntBASIC18.95■□□□□ 0.62
RSPO4Q2I0M5 CA15P1-201ENST00000481698 905 ntBASIC18.95■□□□□ 0.62
RSPO4Q2I0M5 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
RSPO4Q2I0M5 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.95■□□□□ 0.62
RSPO4Q2I0M5 LINC01711-201ENST00000598340 967 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms