Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 AC010980.2-201ENST00000587099 1412 ntBASIC17.64■□□□□ 0.41
CDK5Q00535 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CDK5Q00535 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
CDK5Q00535 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CDK5Q00535 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5Q00535 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5Q00535 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5Q00535 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.63■□□□□ 0.41
CDK5Q00535 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5Q00535 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5Q00535 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5Q00535 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CDK5Q00535 CYP2T1P-201ENST00000432607 1285 ntBASIC17.63■□□□□ 0.41
CDK5Q00535 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5Q00535 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.63■□□□□ 0.41
CDK5Q00535 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.63■□□□□ 0.41
CDK5Q00535 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.63■□□□□ 0.41
CDK5Q00535 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5Q00535 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.63■□□□□ 0.41
CDK5Q00535 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDK5Q00535 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.63■□□□□ 0.41
CDK5Q00535 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5Q00535 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5Q00535 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5Q00535 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5Q00535 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
CDK5Q00535 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5Q00535 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5Q00535 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.63■□□□□ 0.41
CDK5Q00535 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDK5Q00535 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5Q00535 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5Q00535 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5Q00535 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5Q00535 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.62■□□□□ 0.41
CDK5Q00535 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.62■□□□□ 0.41
CDK5Q00535 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.62■□□□□ 0.41
CDK5Q00535 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5Q00535 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5Q00535 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.62■□□□□ 0.41
CDK5Q00535 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5Q00535 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDK5Q00535 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5Q00535 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDK5Q00535 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.62■□□□□ 0.41
CDK5Q00535 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5Q00535 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5Q00535 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5Q00535 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5Q00535 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.62■□□□□ 0.41
CDK5Q00535 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDK5Q00535 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5Q00535 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.62■□□□□ 0.41
CDK5Q00535 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.62■□□□□ 0.41
CDK5Q00535 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.62■□□□□ 0.41
CDK5Q00535 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.62■□□□□ 0.41
CDK5Q00535 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.62■□□□□ 0.41
CDK5Q00535 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.62■□□□□ 0.41
CDK5Q00535 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5Q00535 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.62■□□□□ 0.41
CDK5Q00535 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5Q00535 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5Q00535 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5Q00535 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CDK5Q00535 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5Q00535 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.62■□□□□ 0.41
CDK5Q00535 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.62■□□□□ 0.41
CDK5Q00535 AC120498.9-201ENST00000339021 3867 ntBASIC17.62■□□□□ 0.41
CDK5Q00535 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.62■□□□□ 0.41
CDK5Q00535 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CDK5Q00535 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5Q00535 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5Q00535 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5Q00535 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5Q00535 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5Q00535 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.61■□□□□ 0.41
CDK5Q00535 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5Q00535 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5Q00535 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5Q00535 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.61■□□□□ 0.41
CDK5Q00535 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5Q00535 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.61■□□□□ 0.41
CDK5Q00535 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.61■□□□□ 0.41
CDK5Q00535 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.61■□□□□ 0.41
CDK5Q00535 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.61■□□□□ 0.41
CDK5Q00535 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5Q00535 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.61■□□□□ 0.41
CDK5Q00535 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.61■□□□□ 0.41
CDK5Q00535 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.61■□□□□ 0.41
CDK5Q00535 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.61■□□□□ 0.41
CDK5Q00535 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.61■□□□□ 0.41
CDK5Q00535 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.61■□□□□ 0.41
CDK5Q00535 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.61■□□□□ 0.41
CDK5Q00535 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.61■□□□□ 0.41
CDK5Q00535 AC008694.1-202ENST00000636953 945 ntBASIC17.61■□□□□ 0.41
CDK5Q00535 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CDK5Q00535 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
CDK5Q00535 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5Q00535 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5Q00535 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms